ggKbase home page

SCNpilot_bf_inoc_scaffold_1403_curated_23

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 25614..26042

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 142.0
  • Bit_score: 239
  • Evalue 3.30e-60
Ribonuclease VapC n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA87_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 142.0
  • Bit_score: 239
  • Evalue 2.30e-60
PilT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 142.0
  • Bit_score: 239
  • Evalue 7.30e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGCGTGCCCTGCTGGACGTCAACGTGCTGATCGCGCTGCTCGACGCCGGGCACGTCCACCATGCCCGCGCCAGCCAATGGCTGGTGCAGGAGATCGGCCACGGCTGGGCTTCGTGCCCGCTCACCCAGAACGGCTGCCTGCGCATCATGGCCCAGCCGGCCTACCCGCAGGCCTTGCCCCTGGCCACCGTGGCCAGCCGCCTGGCCCAGGCCCTGGCGCACCCCGCCCACGCCTTCGTGCCCGACGACTACAGCCTGCTGGACACCGACCGCGTGCACTGGCAGCGCCTGCTGGGCCATCGCCAGATCACCGACAGCTACCTGCTGGGCCTGGCCGTGCGCCACGGCTGCCGCTTTGTCAGCTTCGATGCCCGCATCAACCTGGATGCCGTACCCGGTGCCCGGGCAGAGCAGTACGTCGCCCTCTGA
PROTEIN sequence
Length: 143
MRALLDVNVLIALLDAGHVHHARASQWLVQEIGHGWASCPLTQNGCLRIMAQPAYPQALPLATVASRLAQALAHPAHAFVPDDYSLLDTDRVHWQRLLGHRQITDSYLLGLAVRHGCRFVSFDARINLDAVPGARAEQYVAL*