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SCNpilot_bf_inoc_scaffold_742_curated_38

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(39700..40188)

Top 3 Functional Annotations

Value Algorithm Source
Tripartite tricarboxylate transporter TctB family n=1 Tax=Variovorax sp. CF313 RepID=J2T3Q2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 162.0
  • Bit_score: 235
  • Evalue 2.90e-59
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 162.0
  • Bit_score: 235
  • Evalue 1.60e-59
Tripartite tricarboxylate transporter TctB family {ECO:0000313|EMBL:EJL72642.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 162.0
  • Bit_score: 235
  • Evalue 4.10e-59

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
GTGCGCATCAAGAGTCAGAAGGACTTCTTTGCCGGCCTGCTGTACGTGGTCATCGGCGGCGGCTTCGCCATCGGTGCCACCAACTACACCGTCGGCAACGCCGCCCGCATGGGCCCAGGCTACTTTCCCTTGCTGGTGGGCATCCTGCTCGCCATCCTGGGCGCCATCATCGTCGTCAAGTCGCTGGTGGTCGAGACGCCGGACGGCGACAAGATCGGCAAGTGGGCCTGGAAGCCGCTGATCTTCATCATCCTGGCCAACTTCCTGTTCGGCATCCTGCTGGGGGGGGTGCCCTCGCTGGGCATCCCGTCGCTGGGGGTGATCGTCGGCATCATCGTCATTACCCTGGTGGCGGCCAAGGCCGGGCCTGAGTTCAATCTCAAGGAGGTGATCATTCTGGCCATCATTCTGGCCGCCGGCAGCTGGGTGGTCTTCATCTGGGGCCTGAACCTGCAGATGCAGGTGTGGCCGAGCTTCATCTCGGGTTGA
PROTEIN sequence
Length: 163
VRIKSQKDFFAGLLYVVIGGGFAIGATNYTVGNAARMGPGYFPLLVGILLAILGAIIVVKSLVVETPDGDKIGKWAWKPLIFIILANFLFGILLGGVPSLGIPSLGVIVGIIVITLVAAKAGPEFNLKEVIILAIILAAGSWVVFIWGLNLQMQVWPSFISG*