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SCNpilot_bf_inoc_scaffold_742_curated_39

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(40405..42219)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein tapB-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXH0_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 594.0
  • Bit_score: 938
  • Evalue 4.40e-270
type IV pilus assembly protein tapB; K02454 general secretion pathway protein E similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 594.0
  • Bit_score: 938
  • Evalue 1.40e-270
Type IV pilus assembly protein tapB-like protein {ECO:0000313|EMBL:AEG94305.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 594.0
  • Bit_score: 938
  • Evalue 6.20e-270

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Taxonomy

Ramlibacter tataouinensis → Ramlibacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1815
ATGAAGCGCTCCACCCGTCCCGCCCCCTTGAGCCCGGTCGACAGCTACCGCGGCCCGGTGCACTGGCGCCTGCTGCTGGACTGGCTGCGCGAGGACGGCGTCATCAGCGCCGCCGAGGCCATCCGCGTCACCGCCCGCTGCGCCCAGGCCGAAAGCGCGCAGCACGCCCTGGTGCGGCTGGCGGCGGTCGGCATCACGCGCGCCGAAGACGGCGCCGCCATGGACGTCGAGGCCCTGACGCGCTACCTGGCCGACCGCGCCGGCCTGGCCTACCTGCGCATTGACCCGCTGCGCGTGGACGCCGGCAAGGTGTCCGAGACCATGAGCGCCAGCTACGCCGAGCGCCACAAGGTGCTGCCGGTGCAGGTCACCCCCAGCGAGGTGGTGGTGGCCACCAGCGAGCCCTTCATCGACGACTGGCTGGCCGAGGTCGAACGCCAGTCGCGCCGCCAGGTGCGGCGCGTGGTGGCCAACCCGCTGGACATCAAGCGCTACACGGCCGAGTTCTTTGCCCTGGCCAGGTCGGTGCGCGTGGCGCAGAAGCAGGGCAGCGGCGGCAGCGCCGCCACCAGCTTCGAGCAGCTGGTCGAGCTGGGCCGGGCGGGCCGCCAGCTGGACGCCAACGACCAGGGCGTGATCCAGGTGGTGGACTGGCTGTGGCAGTACGCGTTCGACCAGCGCGCCAGCGACATCCACCTGGAGCCACGGCGCGATCAGGGCGTGATCCGCTTTCGCATCGACGGTGTGCTGCACCCGGTCTACCAGGTGCCGGCCGGGGTGATGAACGCCATCACCGCCCGCATCAAGCTGCTGGGGCGCATGGACGTGGTCGAGCGCCGCCGCCCGCAGGACGGCCGCATCAAGACGCGCAACCCGGGCGGCGAGGAAATCGAGATGCGCCTGTCCACCCTGCCCACGGCGTTTGGCGAAAAGCTGGTGATGCGCATCTTCGACCCCGACACCGCGGTAAAGGACCTGGCGGCGCTGGGCTTCACCCCGCACGACGCCGAGCGCTGGCAAGCGCTGGTGCAGCGACCGCACGGCATCGTCCTGGTGACCGGCCCCACCGGCTCGGGCAAGACCACCACGCTGTATTCCACCCTGCGCCGCGTGGCCACCGAAGAGGTCAACGTCAGCACCATCGAGGACCCGATTGAGCGCATTGATCCGGCGCTCAACCAGACCCAGGTACAGCCGCAGCTGGACTTCAGCTTCGCCGAGGGCGTGCGCGCGCTGATGCGGCAGGACCCGGACATCATCATGATCGGCGAGATCCGCGACCTGGAGACCGCCGAGATGGCGGTGCAGGCCGCGCTCACCGGCCACCTGGTGTTCAGCACCCTGCACACCAACGACGCGCCCTCGGCGCTGACGCGCCTGATGGAGCTGGGCGTGCCGCCCTACCTGCTGTCGGCCACCATCCTGGGCGTGCTGGCGCAGCGCCTGGTGCGCACCCTGTGCCCGCACTGCCGGCAGCCGGACGAGCAAGGTCCTTATGGGCTGCTGTCCGAGGTCATCCAGCCCTGGAAGATCAAGGCCGCCGACTACCGTCCGTACAAGCCGGTCGGCTGCATCGACTGCCGGATGACGGGTTTTCGTGGCCGCATGGGCATCTACGAGCTGCTCACCGTCACCGAGGCCTTCAAGGCGCGGGTGCGCGCCGACGTCGACCCCTCGGCGCTGCGCCAGCAGGCGATCGCCGACGGCATGCGCCCGCTGCGGCTGGCCGGCGCCCTGCGCGCGGCCGAAGGCCTGACCACGCTGGAAGAGGTGATCGCCGCCACGCCGCCGCTGGACCCGGGACATCACCCCTGA
PROTEIN sequence
Length: 605
MKRSTRPAPLSPVDSYRGPVHWRLLLDWLREDGVISAAEAIRVTARCAQAESAQHALVRLAAVGITRAEDGAAMDVEALTRYLADRAGLAYLRIDPLRVDAGKVSETMSASYAERHKVLPVQVTPSEVVVATSEPFIDDWLAEVERQSRRQVRRVVANPLDIKRYTAEFFALARSVRVAQKQGSGGSAATSFEQLVELGRAGRQLDANDQGVIQVVDWLWQYAFDQRASDIHLEPRRDQGVIRFRIDGVLHPVYQVPAGVMNAITARIKLLGRMDVVERRRPQDGRIKTRNPGGEEIEMRLSTLPTAFGEKLVMRIFDPDTAVKDLAALGFTPHDAERWQALVQRPHGIVLVTGPTGSGKTTTLYSTLRRVATEEVNVSTIEDPIERIDPALNQTQVQPQLDFSFAEGVRALMRQDPDIIMIGEIRDLETAEMAVQAALTGHLVFSTLHTNDAPSALTRLMELGVPPYLLSATILGVLAQRLVRTLCPHCRQPDEQGPYGLLSEVIQPWKIKAADYRPYKPVGCIDCRMTGFRGRMGIYELLTVTEAFKARVRADVDPSALRQQAIADGMRPLRLAGALRAAEGLTTLEEVIAATPPLDPGHHP*