ggKbase home page

SCNpilot_bf_inoc_scaffold_442_curated_186

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(188390..189343)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=2 Tax=Rahnella RepID=E8XZ81_RAHSY similarity UNIREF
DB: UNIREF100
  • Identity: 33.8
  • Coverage: 293.0
  • Bit_score: 155
  • Evalue 7.50e-35
Uncharacterized protein {ECO:0000313|EMBL:KKN82600.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.6
  • Coverage: 301.0
  • Bit_score: 171
  • Evalue 1.90e-39
putative DNA-binding transcriptional regulator; K14057 LysR family transcriptional regulator, regulator of abg operon similarity KEGG
DB: KEGG
  • Identity: 33.8
  • Coverage: 293.0
  • Bit_score: 155
  • Evalue 2.40e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 954
ATGAGCACAGCCGATTCCTGGTCCACCATCCGGTTGCATCACTTGCGCGATCTGCTCGCGGTCGTGGAAACCGGAAGCTTGCGGGCGGCCGCCCGCAAGCTTGGGCTGACGCAGCCGTCGCTGACGAAGAGCCTGCGCCAGCTCGAAGAGCAGACGGCGCTGGCGTTGCTCGTGCGTAGCAAGCACGGGGTGACGTTGACCAGCGCGGGCCAGCACCTGGTCGAACGGGCCCGCCTGATCGAGTCCGAGCTGCGACGCACCGCCGAAGATCTGGAGCTGTTGCGTGGAGGTACCGTCCGATCGGTGTCGGTGGGGGTGTCCATGGCCACGCCGCTGGACTTCATTGCGCGCGCAGTTGCCGCGCTCCATCAGCAAGATCCTGGCCTGAGCGTGCAGATTTTCGAAGGCGTTCAGGCCAAGATGATCGCCGACGTGCGCCAGGGGGTCGTCGATTTCGCAATCATGCCGGTGACCCAGCGCGATCCGCTCCTGGACTTGCGGGCGCGACCGTTGTTTCATACGCGCGTCGTGGTTGTTGGCCGCGCTGGCCACCCCTGTGCCTCGGCGCGGAGCCTGGCTGAGCTGACCGGTTGTCACTGGATCACGCCCCACCGCCGCGGGGTGCTCGATGGCATGGTCGAACGCTTGGCGACTGGCATGCAACTGCCGCCGTTCAATCGCCCGATCCAATGCGATTCATCGCCGATGTACTGGGATCTGATTGCCCACACCGATCTGCTGGGACTGTCGTTGGCGACCAAGCTGGACGACAACTCGGTGGCAGGCGCTCAAATCATCTACGACGGCCCTCCACTGCGCGAAGTGTCTGTTTCGCTGGTTCATCGCACCGATTTCCCTCAGAACGTCATCGCCGGCGAGCTGGCTCGGCGATGCCGCGAAGAAGCCGCGATCTATGCCCACCGTCGTGCAGGATCGATGTCTGTGCGGACTTGA
PROTEIN sequence
Length: 318
MSTADSWSTIRLHHLRDLLAVVETGSLRAAARKLGLTQPSLTKSLRQLEEQTALALLVRSKHGVTLTSAGQHLVERARLIESELRRTAEDLELLRGGTVRSVSVGVSMATPLDFIARAVAALHQQDPGLSVQIFEGVQAKMIADVRQGVVDFAIMPVTQRDPLLDLRARPLFHTRVVVVGRAGHPCASARSLAELTGCHWITPHRRGVLDGMVERLATGMQLPPFNRPIQCDSSPMYWDLIAHTDLLGLSLATKLDDNSVAGAQIIYDGPPLREVSVSLVHRTDFPQNVIAGELARRCREEAAIYAHRRAGSMSVRT*