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SCNpilot_bf_inoc_scaffold_535_curated_12

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 11060..11626

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000308ED7A similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 205.0
  • Bit_score: 254
  • Evalue 9.20e-65
RNA-binding protein {ECO:0000313|EMBL:KJA11688.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 189.0
  • Bit_score: 264
  • Evalue 1.60e-67
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 191.0
  • Bit_score: 245
  • Evalue 1.00e-62

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGGGCAATAAACTTTATGTCGGCAACCTGCCGTATGGCGTGCGCGACGCCGATCTGGAGCAGGCGTTTGCACAATTCGGCTCGGTCACCAGTGCCAAGGTGATGATGGAGCGCGACACCGGTCGCTCCAAGGGCTTTGGTTTCGTCGAGATGGGCAGCGACGCCGAGGCGCAGGCCGCCATCAACGGCATGAATGGTCAGCCGCTGGGTGGCCGCAACGTGGTGGTCAACGAAGCGCGCCCGATGGAAGCGCGCCCCCCGCGCTCCGGCGGCTTCGGTGGCGGCGGTGGTTACGGCGGCGGCGGTGGTGGCTACGGCGGTGGCCGTCGTGAAGGCGGCGGTGGCGGCTACGGCGGCGGCGGCGGCGGTGGTGGTTACGGTGGCGGTGGCGGCTATGGCGGCGGCCGGCGCGAAGGCAGTGGCTACGGCGGCGGCCAGGACGGGAACTTCCGCAGCCCCTACGGCCAAGGCCCGCGCGGCGGTGGCGGTGCGGGTGGTCGTCGCGAGGGCGGCTACGGCGGTGGTCGGCGCGAAGGCGGTTACGGCGGCGGCCGTGACGACGAGTGA
PROTEIN sequence
Length: 189
MGNKLYVGNLPYGVRDADLEQAFAQFGSVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRNVVVNEARPMEARPPRSGGFGGGGGYGGGGGGYGGGRREGGGGGYGGGGGGGGYGGGGGYGGGRREGSGYGGGQDGNFRSPYGQGPRGGGGAGGRREGGYGGGRREGGYGGGRDDE*