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SCNpilot_bf_inoc_scaffold_535_curated_73

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 80098..81057

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBS1_ALIDK similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 314.0
  • Bit_score: 448
  • Evalue 5.60e-123
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 314.0
  • Bit_score: 448
  • Evalue 1.80e-123
LysR substrate-binding protein {ECO:0000313|EMBL:ADV02060.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 314.0
  • Bit_score: 448
  • Evalue 7.90e-123

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGCAAGTAAAAGAGAACTCACCGCGCATCCGCGCCGTGCTGGGCCAGGTCAGCGACATGGACCTGCGCCTGCTGCGCGTGTTCAAGGCCGTGGTCGAGTGCGGTGGCATGGCGGCGGCCGAGCTGGAGCTGAACATCGGCACCAGCACCGTCAGCCGCCACGTCAAGGACCTGGAGACGCGCCTGGGCCTGACGCTGTGCCGGCGCGGGCGCGGCGGCTTTGCCCTCGCGCCCGAGGGCCAGCGCGTGTACGACGAGACGCTGCGCCTGCTGGCGGCGGTGGACGGCTTTCGCGCCGGCATCGACGACATCCACCAGCGCATGGGCGGGCAGCTGTCGGTGGCGTTGTTCGACAAGACCGCCAGCAATCCGCAGGCGCGCATCCACGCCGCCATCGCCACCTTTGCCCGCCAGGCGCCCGACGTGGCGTTGCACCTGCACGTGGGCAGCATCCAGACCATCGAGCGCGGCGTGATGGACGGCAGCTTCGCCGTCGGCGTGATCCCGGCGCACCGCGCCTCGGCCAGCCTGCGCTACGAACGGCTGTTTGGCGAGATCATGCACCTGTATGGCGGCAGCGCTCATTCGATATTCAATTCAGAGCATTCGGCGCTTGACTGGCGGGCGTTGCGGGCCAGAAACGACTTTGCCGGCCTGGGCTACCACTCGCCCAACATGCAGCTGGCGCACGGCCAGCGCCTGCGCCGCGGCGCCACCGCCTACGACCAGGAAGCCATCGCCACGCTGATCCTGTCGGGCCGCTTCATCGGCTTTCTGCCCGACCACTACGCCGAAGCCTTCGTGCAGCGCGGCCAGATGCGCGCCATCGCACCCGCGCGGCTGCGCTACGACTGCGACTTCGTCAGCGTGCTGCGCCGCTCGCCACAGCCTTCGCGCGCGGCGCTGGCGTTTCACGCGGCCTTGCTGGCTGCGCATGCGTCAATGACGACGGACGCATGA
PROTEIN sequence
Length: 320
MQVKENSPRIRAVLGQVSDMDLRLLRVFKAVVECGGMAAAELELNIGTSTVSRHVKDLETRLGLTLCRRGRGGFALAPEGQRVYDETLRLLAAVDGFRAGIDDIHQRMGGQLSVALFDKTASNPQARIHAAIATFARQAPDVALHLHVGSIQTIERGVMDGSFAVGVIPAHRASASLRYERLFGEIMHLYGGSAHSIFNSEHSALDWRALRARNDFAGLGYHSPNMQLAHGQRLRRGATAYDQEAIATLILSGRFIGFLPDHYAEAFVQRGQMRAIAPARLRYDCDFVSVLRRSPQPSRAALAFHAALLAAHASMTTDA*