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SCNpilot_bf_inoc_scaffold_248_curated

Search features with annotation key words

Displaying items 61-90 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_248_curated_61
Capnocytophaga sp. oral taxon 335, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(63703..64968)
DNA (1266bp) protein (422aa)
Transporter, major facilitator family protein n=5 Tax=Capnocytophaga RepID=I9E337_9FLAO
Transporter, major facilitator family protein {ECO:0000313|EMBL:EJF35786.1}; TaxID=1125720 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 335 str. F0486.;"
major facilitator superfamily protein; K02429 MFS transporter, FHS family, L-fucose permease
SCNpilot_bf_inoc_scaffold_248_curated_62
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(65092..65820)
DNA (729bp) protein (243aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51); K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:ACU08559.1}; EC=2.3.1.51 {ECO:0000313|EMBL:ACU08559.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X296_FLAB3
SCNpilot_bf_inoc_scaffold_248_curated_63
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(65859..66317)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X295_FLAB3
Sugar translocase {ECO:0000313|EMBL:KIA89627.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_248_curated_64
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

66537..66794
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X294_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA89626.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_248_curated_65
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

66977..68395
DNA (1419bp) protein (473aa)
tRNA nucleotidyltransferase (EC:2.7.7.72)
tRNA nucleotidyltransferase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X292_FLAB3
tRNA nucleotidyltransferase {ECO:0000313|EMBL:KIA84687.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
SCNpilot_bf_inoc_scaffold_248_curated_66
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(68479..69531)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KKJ8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KEY18542.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_248_curated_67
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(69653..70150)
DNA (498bp) protein (166aa)
Putative DNA mismatch repair protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0A2_FLAB3
DNA mismatch repair protein
Putative DNA mismatch repair protein {ECO:0000313|EMBL:ACU06787.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_248_curated_68
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

70285..71556
DNA (1272bp) protein (424aa)
Serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Serine hydroxymethyltransferase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0A3_FLAB3
SCNpilot_bf_inoc_scaffold_248_curated_69
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

71892..72338
DNA (447bp) protein (149aa)
Regulatory protein RecX n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0A6_FLAB3
RecX family transcriptional regulator; K03565 regulatory protein
Regulatory protein RecX {ECO:0000313|EMBL:ACU06791.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_248_curated_70
unknown

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comp(72368..72499)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_248_curated_71
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(72505..73710)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D6818
FAD dependent oxidoreductase {ECO:0000313|EMBL:EOR29168.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
fad dependent oxidoreductase
SCNpilot_bf_inoc_scaffold_248_curated_72
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(73712..74476)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HPU5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ57482.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_248_curated_73
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(74481..75029)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI00035DEB5B
Contig_60, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16422.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
lipocalin; K03098 outer membrane lipoprotein Blc
SCNpilot_bf_inoc_scaffold_248_curated_74
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(75044..76021)
DNA (978bp) protein (326aa)
Radical SAM domain protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RYF1_LEAB4
radical sam domain protein
Radical SAM domain protein {ECO:0000313|EMBL:ADQ18187.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
SCNpilot_bf_inoc_scaffold_248_curated_75
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

76490..77008
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036A09B5
Uncharacterized protein {ECO:0000313|EMBL:KIC62687.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
General stress protein
SCNpilot_bf_inoc_scaffold_248_curated_76
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

77056..78057
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003648C77
Short-chain dehydrogenase {ECO:0000313|EMBL:KFF15871.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_bf_inoc_scaffold_248_curated_77
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

78064..79071
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000380447D
mRNA 3'-end processing factor {ECO:0000313|EMBL:KIC62686.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
mRNA 3'-end processing factor; K07577 putative mRNA 3-end processing factor
SCNpilot_bf_inoc_scaffold_248_curated_78
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

79068..80648
DNA (1581bp) protein (527aa)
ATP-dependent DNA ligase {ECO:0000313|EMBL:KIC62685.1}; EC=6.5.1.1 {ECO:0000313|EMBL:KIC62685.1};; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00037679E7
SCNpilot_bf_inoc_scaffold_248_curated_79
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

80645..83107
DNA (2463bp) protein (821aa)
ATP dependent helicase, lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036324CB
DEAD/DEAH box helicase {ECO:0000313|EMBL:KIC62684.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
SCNpilot_bf_inoc_scaffold_248_curated_80
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

83104..83751
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00037DE60B
Uncharacterized protein {ECO:0000313|EMBL:KIC62683.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
calcineurin-like phosphoesterase
SCNpilot_bf_inoc_scaffold_248_curated_81
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(83748..84302)
DNA (555bp) protein (185aa)
Heme oxygenase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KPJ8_9FLAO
Heme oxygenase {ECO:0000313|EMBL:KFF18166.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
Heme oxygenase
SCNpilot_bf_inoc_scaffold_248_curated_82
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(84307..86505)
DNA (2199bp) protein (733aa)
Phytochrome, two-component sensor histidine kinase (EC:2.7.3.-)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W641_9FLAO
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFK33278.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
SCNpilot_bf_inoc_scaffold_248_curated_83
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

86869..87522
DNA (654bp) protein (218aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FUX6_ECHVK
Uncharacterized protein {ECO:0000313|EMBL:KFC20768.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
SCNpilot_bf_inoc_scaffold_248_curated_84
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(87583..88566)
DNA (984bp) protein (328aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
lipoate-protein ligase A; K03800 lipoate-protein ligase A [EC:2.7.7.63]
Lipoate-protein ligase A n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1T5_FLAB3
SCNpilot_bf_inoc_scaffold_248_curated_85
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

88850..89488
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0D5_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU06820.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_248_curated_86
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

89558..90367
DNA (810bp) protein (270aa)
Polysaccharide export outer membrane protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0D6_FLAB3
polysaccharide export outer membrane protein
Polysaccharide export outer membrane protein {ECO:0000313|EMBL:ACU06821.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_248_curated_87
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

90373..92697
DNA (2325bp) protein (775aa)
Tyrosine-protein kinase wzc (EC:2.7.10.2)
Tyrosine-protein kinase wzc n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0D7_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KEY18767.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
SCNpilot_bf_inoc_scaffold_248_curated_88
unknown

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92832..92981
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_248_curated_89
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

93509..94477
DNA (969bp) protein (323aa)
UDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
NAD dependent epimerase/dehydratase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8U5_9FLAO
Vi polysaccharide biosynthesis protein VipB/TviC {ECO:0000313|EMBL:KEY18768.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
SCNpilot_bf_inoc_scaffold_248_curated_90
Weeksella virosa, Weeksella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

95829..96587
DNA (759bp) protein (253aa)
nucleotide sugar dehydrogenase; K02474 UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.-]
Nucleotide sugar dehydrogenase n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0P1W2_WEEVC
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:ADX67672.1}; TaxID=865938 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Weeksella.;" source="Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC; 16016 / NCTC 11634 / CL345/78).;"
Displaying items 61-90 of 90 in total

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