ggKbase home page

SCNpilot_bf_inoc_scaffold_248_curated

Search features with annotation key words

Displaying items 31-60 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_248_curated_31
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31291..31815
DNA (525bp) protein (175aa)
Uncharacterized protein n=3 Tax=Sphingobacterium RepID=C2FXF5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK57574.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_248_curated_32
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31842..32261
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2FXF6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK57575.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_248_curated_33
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32294..32749
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RXG5_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ16310.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
SCNpilot_bf_inoc_scaffold_248_curated_34
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32763..35036
DNA (2274bp) protein (758aa)
Copper-resistance protein, CopA family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FXF8_9SPHI
Copper-resistance protein, CopA family {ECO:0000313|EMBL:EEI92399.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
multicopper oxidase type 3
SCNpilot_bf_inoc_scaffold_248_curated_35
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

35461..36117
DNA (657bp) protein (219aa)
RteC protein n=2 Tax=Bacteroidetes RepID=D7VT63_9SPHI
RteC protein {ECO:0000313|EMBL:EFK34012.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
Tetracycline regulation of excision, RteC
SCNpilot_bf_inoc_scaffold_248_curated_36
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36246..36920
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2S6_9FLAO
Transcriptional regulator {ECO:0000313|EMBL:AIM37533.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
winged helix family two component transcriptional regulator
SCNpilot_bf_inoc_scaffold_248_curated_37
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36917..38200
DNA (1284bp) protein (428aa)
Histidine kinase A domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FUP0_9SPHI
Histidine kinase {ECO:0000313|EMBL:AIM37534.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
integral membrane sensor signal transduction histidine kinase
SCNpilot_bf_inoc_scaffold_248_curated_38
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

38355..38738
DNA (384bp) protein (128aa)
dgkA; Diacylglycerol kinase (EC:2.7.1.107); K00901 diacylglycerol kinase [EC:2.7.1.107]
Diacylglycerol kinase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FT27_9FLAO
Diacylglycerol kinase {ECO:0000313|EMBL:KIA97532.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
SCNpilot_bf_inoc_scaffold_248_curated_39
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

38722..39417
DNA (696bp) protein (232aa)
Membrane-associated phospholipid phosphatase n=1 Tax=Joostella marina DSM 19592 RepID=I3C6S3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC17863.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
phosphoesterase PA-phosphatase-like protein
SCNpilot_bf_inoc_scaffold_248_curated_40
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

39486..40889
DNA (1404bp) protein (468aa)
OMA87 related protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FRI1_9FLAO
OMA87 related protein {ECO:0000313|EMBL:EIA08964.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
putative signal peptide
SCNpilot_bf_inoc_scaffold_248_curated_41
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

40975..42009
DNA (1035bp) protein (345aa)
Uncharacterized protein n=2 Tax=Riemerella anatipestifer RepID=E4TBG3_RIEAD
Uncharacterized protein {ECO:0000313|EMBL:KFF11116.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_248_curated_42
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

42074..42502
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003780E27
Uncharacterized protein {ECO:0000313|EMBL:KFF14948.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_248_curated_43
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

42507..44918
DNA (2412bp) protein (804aa)
TonB-dependent receptor n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2S3_9FLAO
TonB-dependent receptor {ECO:0000313|EMBL:KFF22377.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
TonB-dependent receptor plug
SCNpilot_bf_inoc_scaffold_248_curated_44
unknown

Not on your lists

44930..45034
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_248_curated_45
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

45038..45526
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B79C26
Uncharacterized protein {ECO:0000313|EMBL:KEQ30138.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
metal-dependent phosphohydrolase
SCNpilot_bf_inoc_scaffold_248_curated_46
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

45528..46319
DNA (792bp) protein (264aa)
PAP2 family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2S2_9FLAO
PA-phosphatase {ECO:0000313|EMBL:AIM37536.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
PA-phosphatase-like phosphoesterase
SCNpilot_bf_inoc_scaffold_248_curated_47
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

46331..46747
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Myroides RepID=K1HSS1_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ41152.1}; Flags: Precursor;; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2801.;"
hypothetical protein; K08978 putative membrane protein
SCNpilot_bf_inoc_scaffold_248_curated_48
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

46799..47620
DNA (822bp) protein (274aa)
tetracycline resistance element mobilization regulatory protein RteC n=1 Tax=Empedobacter brevis RepID=UPI00036FF696
Uncharacterized protein {ECO:0000313|EMBL:GAE65855.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
tetracycline regulation of excision RteC
SCNpilot_bf_inoc_scaffold_248_curated_49
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(47691..48329)
DNA (639bp) protein (213aa)
Helicase C-terminal domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZW3_9FLAO
Helicase C-terminal domain protein {ECO:0000313|EMBL:EFK33893.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
helicase
SCNpilot_bf_inoc_scaffold_248_curated_50
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(48369..53114)
DNA (4746bp) protein (1582aa)
Helicase C-terminal domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FRT9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAE65854.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
N-6 DNA methylase
SCNpilot_bf_inoc_scaffold_248_curated_51
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(53101..53538)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FRT8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI94303.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_248_curated_52
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(53682..54563)
DNA (882bp) protein (294aa)
Putative toxin-antitoxin system, toxin component, Fic family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FRT3_9SPHI
Putative toxin-antitoxin system, toxin component, Fic family {ECO:0000313|EMBL:EEI94298.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
KilA-N, DNA-binding domain-containing protein
SCNpilot_bf_inoc_scaffold_248_curated_53
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(54563..56650)
DNA (2088bp) protein (696aa)
DNA topoisomerase {ECO:0000313|EMBL:EFK56967.1}; EC=5.99.1.2 {ECO:0000313|EMBL:EFK56967.1};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT66_9SPHI
SCNpilot_bf_inoc_scaffold_248_curated_54
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(56657..58132)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FRT1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI94296.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_248_curated_55
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(58217..58525)
DNA (309bp) protein (103aa)
Uncharacterized protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2FRT0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK56969.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_248_curated_56
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(58537..58890)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT69_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK56970.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_248_curated_57
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59139..59990)
DNA (852bp) protein (284aa)
RteC protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FRS7_9SPHI
RteC protein {ECO:0000313|EMBL:EEI94292.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
Tetracycline regulation of excision, RteC
SCNpilot_bf_inoc_scaffold_248_curated_58
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

60520..61299
DNA (780bp) protein (260aa)
3-oxoacyl-acyl-carrier protein reductase n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2FPR4_9GAMM
Short-chain dehydrogenase {ECO:0000313|EMBL:KFF73846.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
short-chain dehydrogenase
SCNpilot_bf_inoc_scaffold_248_curated_59
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(61702..62496)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X298_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA84688.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_248_curated_60
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(62748..63701)
DNA (954bp) protein (318aa)
ROK family protein; K00845 glucokinase [EC:2.7.1.2]
ROK family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM61_CHIPD
ROK family protein {ECO:0000313|EMBL:ACU63966.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Displaying items 31-60 of 90 in total

View Taxonomy