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SCNpilot_bf_inoc_scaffold_248_curated_48

Organism: scnpilot_dereplicated_Chryseobacterium_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 46799..47620

Top 3 Functional Annotations

Value Algorithm Source
tetracycline resistance element mobilization regulatory protein RteC n=1 Tax=Empedobacter brevis RepID=UPI00036FF696 similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 272.0
  • Bit_score: 424
  • Evalue 7.50e-116
Uncharacterized protein {ECO:0000313|EMBL:GAE65855.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 272.0
  • Bit_score: 415
  • Evalue 6.40e-113
tetracycline regulation of excision RteC similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 274.0
  • Bit_score: 414
  • Evalue 2.40e-113

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Taxonomy

Chryseobacterium indologenes → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 822
ATGGAAAAATTTTACAATGAAACATTAGAAAAACTCGAAACGGACATCAAAGAATTGGAAATGGAAGCGGATAGCTCCATACAACAGGTTGAAACCGTAATCAGGCTTATCATCAAATGCCTGGCTAACGTAAAAGAGTATGTATTGAATAAAGGATTTAAGAATACAGATGAAGAAATCCGTTTTTTCAAGTATCAGAAACCTGTAATGGTATCAAAACTGATTTATTATAATGCGATTTATAAAATCGAAACCAAAAAGCCCTATGGTGCAAAGCCTATGAGGAAATACCTTAATGACGAACTGAAAAAGCTGAAACGATACTTTGACAACAACCTCGAATTTTATAAATACTACCGCACCAACAATTCTTTTATTGACGATAAGCTGTTTTTAAGAAACAAATACGATATAAAGCTAAGTCTGGACACGTTCTATTTTGAAGCAGACCCGAACTTTTCCACCTCTCACGATTACAAGGCAGCTAAAATTATCGCCAATGACCTGATACAAGTCTATCTCGAAGACCAGCTTCATAAAACGGTTTATAAAGAAAAATCCACCAACCTGCCAAAGCTAAACTGGGCGGGAAGCAAGACTGCATTAACCGAACTGATATACGCCCTTCACGCTCAGGGCGCATTCGATAATGCCGATATTAAAATCATTGCCAAAACTTTTGAAAGCATCTTTAATATTGACTTGGGCGACTTCTATCATACCTTTATGGAACTTAAAAACCGAAAGGTAAACCGAACGAAATTCCTTGACAGTCTGCGTGATGCACTGATAAAACGGATGGACGAGCAGGAAGAAGATTAA
PROTEIN sequence
Length: 274
MEKFYNETLEKLETDIKELEMEADSSIQQVETVIRLIIKCLANVKEYVLNKGFKNTDEEIRFFKYQKPVMVSKLIYYNAIYKIETKKPYGAKPMRKYLNDELKKLKRYFDNNLEFYKYYRTNNSFIDDKLFLRNKYDIKLSLDTFYFEADPNFSTSHDYKAAKIIANDLIQVYLEDQLHKTVYKEKSTNLPKLNWAGSKTALTELIYALHAQGAFDNADIKIIAKTFESIFNIDLGDFYHTFMELKNRKVNRTKFLDSLRDALIKRMDEQEED*