ggKbase home page

SCNpilot_bf_inoc_scaffold_203_curated

Search features with annotation key words

Displaying items 121-150 of 178 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_203_curated_121
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

130708..130995
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VX60_9FLAO
Cytochrome C {ECO:0000313|EMBL:KEY18190.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_203_curated_122
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

130997..131341
DNA (345bp) protein (115aa)
Export-related chaperone CsaA n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CGC2_9FLAO
tRNA-binding protein {ECO:0000313|EMBL:KFE98473.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
CsaA protein; K06878 tRNA-binding protein
SCNpilot_bf_inoc_scaffold_203_curated_123
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

131378..132076
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZQ3_FLAB3
3'-5' exonuclease {ECO:0000313|EMBL:KEY18188.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein; K07501 hypothetical protein
SCNpilot_bf_inoc_scaffold_203_curated_124
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

132178..132504
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Solanum lycopersicum RepID=K4AQM0_SOLLC
FeS assembly SUF system protein {ECO:0000313|EMBL:KFE98471.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_203_curated_125
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(132542..132946)
DNA (405bp) protein (135aa)
Putative stress-induced protein OsmC n=2 Tax=Elizabethkingia anophelis RepID=H0KQT1_9FLAO
OsmC family protein {ECO:0000313|EMBL:KIA89318.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
OsmC family protein
SCNpilot_bf_inoc_scaffold_203_curated_126
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(133021..133422)
DNA (402bp) protein (134aa)
OsmC family protein n=2 Tax=Elizabethkingia meningoseptica RepID=R9CP28_ELIME
OsmC family protein {ECO:0000313|EMBL:KIA84492.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
putative redox protein, regulator of disulfide bond formation
SCNpilot_bf_inoc_scaffold_203_curated_127
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(133437..134285)
DNA (849bp) protein (283aa)
Hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4); K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZN8_FLAB3
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:KIA89317.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_bf_inoc_scaffold_203_curated_128
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

134434..135693
DNA (1260bp) protein (420aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; Tripeptide aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
peptidase T (EC:3.4.11.4); K01258 tripeptide aminopeptidase [EC:3.4.11.4]
Peptidase T n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZN7_FLAB3
SCNpilot_bf_inoc_scaffold_203_curated_129
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(135792..135980)
DNA (189bp) protein (63aa)
Sugar porter (SP) family MFS transporter n=5 Tax=Bacteroides fragilis RepID=I3HQN4_BACFG
sugar transporter
D-xylose proton-symporter XylE {ECO:0000313|EMBL:GAO28476.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
SCNpilot_bf_inoc_scaffold_203_curated_130
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(135977..137131)
DNA (1155bp) protein (385aa)
Sugar porter (SP) family MFS transporter n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1G0Y9_BACFG
D-xylose proton-symporter XylE {ECO:0000313|EMBL:GAO28476.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
sugar transporter
SCNpilot_bf_inoc_scaffold_203_curated_131
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(137427..138764)
DNA (1338bp) protein (446aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
Membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-]
Membrane-associated zinc metalloprotease n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZN6_FLAB3
SCNpilot_bf_inoc_scaffold_203_curated_132
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(138873..139340)
DNA (468bp) protein (156aa)
Uncharacterized protein n=3 Tax=Elizabethkingia RepID=L8K9C5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC40048.1}; TaxID=238 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica (Chryseobacterium meningosepticum).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_203_curated_133
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(139390..139830)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CL06_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL73709.1}; Flags: Precursor;; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_203_curated_134
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

139951..140703
DNA (753bp) protein (251aa)
Hydrolase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZN4_FLAB3
Hydrolase; K08590 carbon-nitrogen hydrolase family protein
Hydrolase {ECO:0000313|EMBL:ACU06569.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_203_curated_135
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(140700..140999)
DNA (300bp) protein (100aa)
Thioredoxin n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZN3_FLAB3
Thioredoxin {ECO:0000313|EMBL:KIA84498.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
thioredoxin C-2; K03671 thioredoxin 1
SCNpilot_bf_inoc_scaffold_203_curated_136
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(141053..141256)
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:KIA89311.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_bf_inoc_scaffold_203_curated_137
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(141289..141510)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1MFI0_9FLAO
Membrane protein {ECO:0000313|EMBL:KIA84724.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_203_curated_138
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(141511..141885)
DNA (375bp) protein (125aa)
Rhodanese-related sulfurtransferase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CL27_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KEY18174.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Rhodanese-related sulfurtransferase
SCNpilot_bf_inoc_scaffold_203_curated_139
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(141889..143328)
DNA (1440bp) protein (480aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZN1_FLAB3
Metallo-beta-lactamase superfamily protein
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:ACU06566.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_203_curated_140
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(143409..143771)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZN0_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU06565.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_203_curated_141
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(143785..143925)
DNA (141bp) protein (47aa)
Conserved hypothetical transmembrane protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZM9_FLAB3
hypothetical protein; K07090
Conserved hypothetical transmembrane protein {ECO:0000313|EMBL:ACU06564.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_203_curated_142
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(143922..144074)
DNA (153bp) protein (51aa)
Conserved hypothetical transmembrane protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZM9_FLAB3
hypothetical protein; K07090
Conserved hypothetical transmembrane protein {ECO:0000313|EMBL:ACU06564.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_203_curated_143
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(144211..146259)
DNA (2049bp) protein (683aa)
Outer membrane receptor (OMR) family transporter n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RYN7_9FLAO
TonB-dependent receptor {ECO:0000313|EMBL:KIA89304.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
outer membrane receptor (OMR) family transporter; K02014 iron complex outermembrane recepter protein
SCNpilot_bf_inoc_scaffold_203_curated_144
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(146269..147123)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B73206
Uncharacterized protein {ECO:0000313|EMBL:KEY18168.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_203_curated_145
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(147216..147578)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1LXL2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB59766.1}; TaxID=883098 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum CCUG 30536.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_203_curated_146
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

147716..149236
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VXA7_9FLAO
ATPase {ECO:0000313|EMBL:KFF30111.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
hypothetical protein; K06915
SCNpilot_bf_inoc_scaffold_203_curated_147
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

149281..150504
DNA (1224bp) protein (408aa)
DNA polymerase III epsilon subunit (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III epsilon subunit n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZM7_FLAB3
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KIA89302.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_bf_inoc_scaffold_203_curated_148
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

150639..151838
DNA (1200bp) protein (400aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20]
Diaminopimelate decarboxylase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZM6_FLAB3
SCNpilot_bf_inoc_scaffold_203_curated_149
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

151928..152419
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Riemerella anatipestifer RepID=L7TV93_RIEAN
Uncharacterized protein {ECO:0000313|EMBL:KEY18164.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_203_curated_150
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

152453..152842
DNA (390bp) protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:KEY18163.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Displaying items 121-150 of 178 in total

View Taxonomy