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SCNpilot_bf_inoc_scaffold_203_curated

Search features with annotation key words

Displaying items 1-30 of 178 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_203_curated_1
unknown

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1..102
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_203_curated_2
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(157..1821)
DNA (1665bp) protein (555aa)
TPR repeat-containing protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0K1_FLAB3
Tetratricopeptide TPR1 repeat-containing protein {ECO:0000313|EMBL:KIA82322.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_203_curated_3
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1915..2790)
DNA (876bp) protein (292aa)
Phosphate ABC transporter, phosphate-binding component n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0K0_FLAB3
Phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIA89872.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein
SCNpilot_bf_inoc_scaffold_203_curated_4
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2780..2974)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYQ1_9FLAO
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KIA89873.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_203_curated_5
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3050..3892)
DNA (843bp) protein (281aa)
TonB family protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0J8_FLAB3
Energy transducer TonB {ECO:0000313|EMBL:KEY17731.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
TonB family protein; K03832 periplasmic protein TonB
SCNpilot_bf_inoc_scaffold_203_curated_6
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3926..4495)
DNA (570bp) protein (190aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0J7_FLAB3
Biopolymer transporter ExbD {ECO:0000313|EMBL:KIA89875.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
Biopolymer transport protein ExbD/TolR
SCNpilot_bf_inoc_scaffold_203_curated_7
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4499..5107)
DNA (609bp) protein (203aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0J6_FLAB3
Biopolymer transporter ExbD {ECO:0000313|EMBL:KIA89876.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
Biopolymer transport protein ExbD/TolR
SCNpilot_bf_inoc_scaffold_203_curated_8
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5191..6057)
DNA (867bp) protein (289aa)
MotA/TolQ/ExbB proton channel family protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0J5_FLAB3
Flagellar motor protein MotA {ECO:0000313|EMBL:KIA89877.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
MotA/TolQ/ExbB proton channel family protein; K03561 biopolymer transport protein ExbB
SCNpilot_bf_inoc_scaffold_203_curated_9
unknown

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comp(6059..6184)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_203_curated_10
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6315..9152)
DNA (2838bp) protein (946aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYP6_9FLAO
SCNpilot_bf_inoc_scaffold_203_curated_11
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9295..10047
DNA (753bp) protein (251aa)
Glycosyl transferase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CI83_9FLAO
Glycosyl transferase family 2 {ECO:0000313|EMBL:KEY17737.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Glycosyltransferases involved in cell wall biogenesis
SCNpilot_bf_inoc_scaffold_203_curated_12
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10049..11311)
DNA (1263bp) protein (421aa)
3-deoxy-D-manno-octulosonic-acid transferase; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0J0_FLAB3
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:ACU06876.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_203_curated_13
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11343..12050)
DNA (708bp) protein (236aa)
NLP/P60 protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0I8_FLAB3
Hydrolase Nlp/P60 {ECO:0000313|EMBL:KEY17742.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
NLP/P60 protein
SCNpilot_bf_inoc_scaffold_203_curated_14
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12111..12758)
DNA (648bp) protein (216aa)
Putative O-methyltransferase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KG64_9FLAO
Methyltransferase {ECO:0000313|EMBL:KFE97712.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
O-methyltransferase
SCNpilot_bf_inoc_scaffold_203_curated_15
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12849..13682)
DNA (834bp) protein (278aa)
Putative flagellar motor protein MotB n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0I6_FLAB3
flagellar motor protein MotB; K02557 chemotaxis protein MotB
Putative flagellar motor protein MotB {ECO:0000313|EMBL:ACU06872.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_203_curated_16
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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13762..14691
DNA (930bp) protein (310aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
tRNA(Ile)-lysidine synthase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JW91_9FLAO
SCNpilot_bf_inoc_scaffold_203_curated_17
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14737..16800
DNA (2064bp) protein (688aa)
cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC:1.8.1.8)
Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0I4_FLAB3
Protein-disulfide reductase {ECO:0000313|EMBL:KEY17746.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
SCNpilot_bf_inoc_scaffold_203_curated_18
unknown

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16983..17309
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_203_curated_19
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17260..18507
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000382EC5C
Uncharacterized protein {ECO:0000313|EMBL:KFF11255.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
AraC-type helix-turn-helix domain-containing protein
SCNpilot_bf_inoc_scaffold_203_curated_20
unknown

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18731..19345
DNA (615bp) protein (205aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_203_curated_21
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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19394..20239
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZ97_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE65372.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_203_curated_22
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20269..20712
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000382D21A
Transposase {ECO:0000313|EMBL:KFF09779.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_203_curated_23
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20688..20975
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF09778.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
SCNpilot_bf_inoc_scaffold_203_curated_24
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21186..22790)
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453, ECO:0000256|SAAS:SAAS00051801};; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
phosphoenolpyruvate carboxykinase (EC:4.1.1.49); K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2S7_FLAB3
SCNpilot_bf_inoc_scaffold_203_curated_25
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22917..23825)
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2S8_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08741.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_203_curated_26
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23831..24706)
DNA (876bp) protein (292aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
Malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2SQ41_9FLAO
SCNpilot_bf_inoc_scaffold_203_curated_27
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24780..26720)
DNA (1941bp) protein (647aa)
LysM-repeat protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2T0_FLAB3
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIA90231.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
LysM-repeat protein
SCNpilot_bf_inoc_scaffold_203_curated_28
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26758..28368)
DNA (1611bp) protein (537aa)
Putative cysteine ligase BshC {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275526}; EC=6.-.-.- {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275528};; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
UPF0747 protein FIC_02311 n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2T1_FLAB3
hypothetical protein
SCNpilot_bf_inoc_scaffold_203_curated_29
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28397..30325)
DNA (1929bp) protein (643aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2T2_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08745.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_203_curated_30
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30420..31913)
DNA (1494bp) protein (498aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2T3_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KEY17766.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
Displaying items 1-30 of 178 in total

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