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SCNpilot_bf_inoc_scaffold_605_curated

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_605_curated_1
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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535..1146
DNA (612bp) protein (204aa)
Probable lipoprotein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XP05_FLAIG
lipoprotein precursor
Probable lipoprotein {ECO:0000313|EMBL:CCG52272.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
SCNpilot_bf_inoc_scaffold_605_curated_2
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1619..1771
DNA (153bp) protein (51aa)
Probable lipoprotein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XP05_FLAIG
lipoprotein precursor
Probable lipoprotein {ECO:0000313|EMBL:CCG52272.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
SCNpilot_bf_inoc_scaffold_605_curated_3
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1828..2445
DNA (618bp) protein (206aa)
Probable lipoprotein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XP05_FLAIG
lipoprotein precursor
Probable lipoprotein {ECO:0000313|EMBL:CCG52272.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
SCNpilot_bf_inoc_scaffold_605_curated_4
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2520..5636
DNA (3117bp) protein (1039aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XP03_FLAIG
Uncharacterized protein {ECO:0000313|EMBL:AKC17980.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_605_curated_5
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

5907..6626
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6S9F1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIF30156.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_605_curated_6
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

comp(6656..7000)
DNA (345bp) protein (115aa)
SRP, putative (Fragment) n=1 Tax=Trichomonas vaginalis RepID=A2FKW1_TRIVA
SRP; K01421 putative membrane protein
SRP, putative {ECO:0000313|EMBL:EAX94445.1}; Flags: Fragment;; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
SCNpilot_bf_inoc_scaffold_605_curated_7
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7040..7261
DNA (222bp) protein (74aa)
PspC family transcriptional regulator n=3 Tax=Elizabethkingia RepID=T0NS87_ELIME
PspC family transcriptional regulator {ECO:0000313|EMBL:AKH95791.1}; TaxID=1352940 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica FMS-007.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_605_curated_8
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7315..7827
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KSR1_9FLAO
Putative acetyltransferase YjbC {ECO:0000313|EMBL:CEJ68502.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_605_curated_9
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7854..8585)
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2S4_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KEY17757.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein; K09797 hypothetical protein
SCNpilot_bf_inoc_scaffold_605_curated_10
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8731..9528)
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2S5_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08738.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_605_curated_11
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9683..10501)
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2S5_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KFC24599.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_605_curated_12
unknown

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comp(10832..11260)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI0003702773
SCNpilot_bf_inoc_scaffold_605_curated_13
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11916..12545
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9H266_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KFC21517.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_605_curated_14
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12542..13396
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0T9_DYAFD
Uncharacterized protein {ECO:0000313|EMBL:KFC21518.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_605_curated_15
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13687..14391
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. ANC 3994 RepID=N8Q8Y0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDN72918.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_605_curated_16
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14787..15254)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SBT1_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52772.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_bf_inoc_scaffold_605_curated_17
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15506..17248
DNA (1743bp) protein (581aa)
Zinc finger SWIM domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDC7_CHIPD
zinc finger SWIM domain-containing protein
Zinc finger SWIM domain protein {ECO:0000313|EMBL:ACU57750.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_bf_inoc_scaffold_605_curated_18
unknown

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comp(17902..18189)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_605_curated_19
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(18491..19144)
DNA (654bp) protein (218aa)
GDSL-like protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5X0_9FLAO
GDSL-like protein {ECO:0000313|EMBL:EFK35373.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_605_curated_20
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19366..20826
DNA (1461bp) protein (487aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205]
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0H5_FLAB3
SCNpilot_bf_inoc_scaffold_605_curated_21
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20895..21323
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0H0_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA89708.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_605_curated_22
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21430..22500)
DNA (1071bp) protein (357aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0G6_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU06852.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_605_curated_23
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23315..24172
DNA (858bp) protein (286aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3N3_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU07021.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_605_curated_24
unknown

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24185..25072
DNA (888bp) protein (296aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_605_curated_25
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25076..26002
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W7B2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFE98172.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
SCNpilot_bf_inoc_scaffold_605_curated_26
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26064..26618)
DNA (555bp) protein (185aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
Holliday junction resolvasome, endonuclease subunit; K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYH4_9FLAO
SCNpilot_bf_inoc_scaffold_605_curated_27
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26846..29578
DNA (2733bp) protein (911aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-]
Peptidase family M16 domain protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FHP1_FLAJ1
Peptidase M16 {ECO:0000313|EMBL:KEY18445.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
SCNpilot_bf_inoc_scaffold_605_curated_28
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29605..30168
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2R6_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA84903.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_605_curated_29
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30269..30766
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2R5_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KEY17751.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_605_curated_30
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30839..31237)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Myroides RepID=K1HID1_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ44086.1}; Flags: Precursor;; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2801.;"
hypothetical protein
Displaying items 1-30 of 34 in total

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