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SCNpilot_bf_inoc_scaffold_322_curated

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Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_322_curated_1
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3..335
DNA (333bp) protein (111aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Holliday junction resolvase (EC:3.1.-.-); K07447 putative holliday junction resolvase [EC:3.1.-.-]
Putative Holliday junction resolvase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWL9_9FLAO
SCNpilot_bf_inoc_scaffold_322_curated_2
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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332..904
DNA (573bp) protein (191aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X128_FLAB3
SCNpilot_bf_inoc_scaffold_322_curated_3
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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948..1553
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWL7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIC61572.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_322_curated_4
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1653..2423
DNA (771bp) protein (257aa)
mazG; nucleoside triphosphate pyrophosphohydrolase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
MazG family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWL6_9FLAO
Pyrophosphatase {ECO:0000313|EMBL:KEY19192.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
SCNpilot_bf_inoc_scaffold_322_curated_5
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2502..2915)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W6B9_9FLAO
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KIC63774.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
hypothetical protein; K09959 hypothetical protein
SCNpilot_bf_inoc_scaffold_322_curated_6
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2999..3463)
DNA (465bp) protein (155aa)
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:EFK58915.1}; EC=1.2.1.- {ECO:0000313|EMBL:EFK58915.1};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
aldehyde dehydrogenase (EC:1.2.1.3); K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FWF1_9SPHI
SCNpilot_bf_inoc_scaffold_322_curated_7
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3408..4508)
DNA (1101bp) protein (367aa)
aldehyde dehydrogenase (EC:1.2.1.3); K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
aldehyde dehydrogenase n=1 Tax=Empedobacter brevis RepID=UPI0003785EDD
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EHQ43081.1}; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2801.;"
SCNpilot_bf_inoc_scaffold_322_curated_8
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4923..6044)
DNA (1122bp) protein (374aa)
ABC-2 type transporter n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S7H8_9FLAO
ABC transporter permease {ECO:0000313|EMBL:KIC61296.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
ABC-2 type transporter
SCNpilot_bf_inoc_scaffold_322_curated_9
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6136..7269)
DNA (1134bp) protein (378aa)
ABC-2 type transporter n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S0W1_9FLAO
Multidrug ABC transporter permease {ECO:0000313|EMBL:KIC61316.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
ABC-2 type transporter; K09686 antibiotic transport system permease protein
SCNpilot_bf_inoc_scaffold_322_curated_10
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7421..8164)
DNA (744bp) protein (248aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GP37_9SPHI
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:EOR93597.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
ABC transporter-like protein; K01990 ABC-2 type transport system ATP-binding protein
SCNpilot_bf_inoc_scaffold_322_curated_11
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(8221..9135)
DNA (915bp) protein (305aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Arcticibacter svalbardensis MN12-7 PF7_9SPHI">RepID=R9GPF7_9SPHI
ATPase {ECO:0000313|EMBL:KIC61297.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
sulfate-transporting ATPase
SCNpilot_bf_inoc_scaffold_322_curated_12
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9216..10151)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 326 str. F0382 RepID=L1PVE6_9FLAO
Secretion protein {ECO:0000313|EMBL:KIC61298.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
hypothetical protein; K01993 HlyD family secretion protein
SCNpilot_bf_inoc_scaffold_322_curated_13
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10289..11572)
DNA (1284bp) protein (428aa)
Outer membrane efflux protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPZ7_9SPHI
Transporter {ECO:0000313|EMBL:KIC61317.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
outer membrane efflux protein
SCNpilot_bf_inoc_scaffold_322_curated_14
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11624..12310)
DNA (687bp) protein (229aa)
Transcriptional regulator, TetR family n=2 Tax=Bacteroidetes RepID=D7VT56_9SPHI
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFK56957.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
TetR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_322_curated_15
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12390..14168)
DNA (1779bp) protein (593aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Long-chain-fatty-acid--CoA ligase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X6I1_FLAB3
AMP-dependent synthetase {ECO:0000313|EMBL:KIA86099.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_bf_inoc_scaffold_322_curated_16
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14339..15481
DNA (1143bp) protein (381aa)
acyl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase, C-terminal domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W784_9FLAO
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KIA83385.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
SCNpilot_bf_inoc_scaffold_322_curated_17
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15509..15871
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X6H9_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA86097.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_322_curated_18
unknown

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comp(16008..16442)
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_322_curated_19
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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16678..17640
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z1W6_FLABF
Uncharacterized protein {ECO:0000313|EMBL:KFE99573.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
putative adhesin
SCNpilot_bf_inoc_scaffold_322_curated_20
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(17784..18419)
DNA (636bp) protein (212aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EFK59440.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EFK59440.1};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
Peroxidase n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NP21_9SPHI
peroxidase
SCNpilot_bf_inoc_scaffold_322_curated_21
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(18698..19585)
DNA (888bp) protein (296aa)
Esterase n=4 Tax=Riemerella anatipestifer RepID=E4TDW7_RIEAD
esterase
Esterase {ECO:0000313|EMBL:AFD55045.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;"
SCNpilot_bf_inoc_scaffold_322_curated_22
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19678..20184)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JKC2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL68345.1}; Flags: Precursor;; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_322_curated_23
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20195..21661)
DNA (1467bp) protein (489aa)
outer membrane adhesin-like protein n=1 Tax=Aquimarina agarilytica RepID=UPI0002890168
Uncharacterized protein {ECO:0000313|EMBL:KFC21494.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
thrombospondin type 3 repeat-containing protein
SCNpilot_bf_inoc_scaffold_322_curated_24
unknown

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comp(21809..22474)
DNA (666bp) protein (222aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_322_curated_25
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22779..23369)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W1L7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC20455.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_322_curated_26
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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23518..24390
DNA (873bp) protein (291aa)
Transcriptional regulator, AraC family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W1L8_9FLAO
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFK34229.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
AraC family transcriptional regulator
SCNpilot_bf_inoc_scaffold_322_curated_27
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(24461..27040)
DNA (2580bp) protein (860aa)
TonB-dependent receptor, putative n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3R6_FLAB3
TonB-dependent receptor {ECO:0000313|EMBL:KFF74940.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
TonB-dependent receptor
SCNpilot_bf_inoc_scaffold_322_curated_28
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27167..28210)
DNA (1044bp) protein (348aa)
YceG family protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T3R0_9FLAO
Aminodeoxychorismate lyase {ECO:0000313|EMBL:KIA88877.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
aminodeoxychorismate lyase; K07082 UPF0755 protein
SCNpilot_bf_inoc_scaffold_322_curated_29
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(28264..29049)
DNA (786bp) protein (262aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
Diaminopimelate epimerase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CJC7_9FLAO
hypothetical protein
SCNpilot_bf_inoc_scaffold_322_curated_30
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29243..29920)
DNA (678bp) protein (226aa)
Nicotinamide mononucleotide transporter PnuC n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CJ57_9FLAO
Nicotinamide mononucleotide transporter {ECO:0000313|EMBL:KEY20102.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Ribosyl nicotinamide transporter, pnuC-like protein; K03811 nicotinamide mononucleotide transporter
Displaying items 1-30 of 52 in total

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