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SCNpilot_bf_inoc_scaffold_358_curated

Search features with annotation key words

Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_358_curated_1
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(191..538)
DNA (348bp) protein (116aa)
Transcriptional regulator, HxlR family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYD7_9FLAO
HxlR family transcriptional regulator {ECO:0000313|EMBL:KGO11065.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
HxlR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_358_curated_2
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

629..1153
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYD8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO11066.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_358_curated_3
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1300..2139
DNA (840bp) protein (280aa)
RteC protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYD9_9FLAO
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:KGO11067.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
RteC protein
SCNpilot_bf_inoc_scaffold_358_curated_4
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2403..3953
DNA (1551bp) protein (517aa)
hsdM; type I restriction-modification system, M subunit (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72]
Type I restriction-modification system, M subunit n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYE0_9FLAO
Restriction endonuclease subunit M {ECO:0000313|EMBL:KGO11068.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
SCNpilot_bf_inoc_scaffold_358_curated_5
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4001..5161
DNA (1161bp) protein (387aa)
Uncharacterized protein (Fragment) n=1 Tax=Myroides odoratimimus CCUG 10230 RepID=S2LP79_9FLAO
Restriction endonuclease S subunit {ECO:0000313|EMBL:KGO08827.1}; Flags: Fragment;; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
restriction endonuclease S subunit
SCNpilot_bf_inoc_scaffold_358_curated_6
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5166..6350)
DNA (1185bp) protein (395aa)
restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
Restriction modification system DNA specificity domain protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XEV7_CELAD
Uncharacterized protein {ECO:0000313|EMBL:GAE66354.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
SCNpilot_bf_inoc_scaffold_358_curated_7
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6453..7379
DNA (927bp) protein (309aa)
Site-specific recombinase, phage integrase family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWD0_9FLAO
Putative site-specific recombinase {ECO:0000313|EMBL:GAE66353.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
intQ; integrase
SCNpilot_bf_inoc_scaffold_358_curated_8
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7470..10337
DNA (2868bp) protein (956aa)
hsdR; type I restriction-modification system R subunit (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWD1_9FLAO
Deoxyribonuclease HsdR {ECO:0000313|EMBL:KFC18898.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
SCNpilot_bf_inoc_scaffold_358_curated_9
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10518..10817)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZD9_9FLAO
Membrane protein {ECO:0000313|EMBL:BAP33287.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_358_curated_10
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10865..13213)
DNA (2349bp) protein (783aa)
TonB-dependent siderophore receptor n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VY26_9FLAO
TonB-dependent receptor {ECO:0000313|EMBL:KFF27788.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
TonB-dependent siderophore receptor
SCNpilot_bf_inoc_scaffold_358_curated_11
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13350..14225
DNA (876bp) protein (292aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53]
Putative N-carbamoylputrescine amidase n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G2U6_9SPHI
Acyltransferase {ECO:0000313|EMBL:KFC20440.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SCNpilot_bf_inoc_scaffold_358_curated_12
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14341..15357
DNA (1017bp) protein (339aa)
Conserved uncharacterized protein, DUF1016 id=2042040 bin=GWE2_Bacteroidetes_40_15 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
Contig195, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74462.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_358_curated_13
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15385..16476
DNA (1092bp) protein (364aa)
Putative agmatine deiminase {ECO:0000313|EMBL:KHJ38900.1}; EC=3.5.3.12 {ECO:0000313|EMBL:KHJ38900.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
agmatine deiminase (EC:3.5.3.12); K10536 agmatine deiminase [EC:3.5.3.12]
agmatine deiminase n=1 Tax=Pedobacter arcticus RepID=UPI0002E14BC2
SCNpilot_bf_inoc_scaffold_358_curated_14
unknown

Not on your lists

16709..16900
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_358_curated_15
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16945..17601)
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4E8_FLAB3
Protease {ECO:0000313|EMBL:KIA83237.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_358_curated_16
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17645..17953)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4E7_FLAB3
hypothetical protein; K06891 ATP-dependent Clp protease adaptor protein ClpS
Uncharacterized protein {ECO:0000313|EMBL:ACU07285.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_358_curated_17
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17983..19344)
DNA (1362bp) protein (454aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4E6_FLAB3
transporter
Uncharacterized protein {ECO:0000313|EMBL:ACU07284.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_358_curated_18
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19493..21439)
DNA (1947bp) protein (649aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EV14_EMTOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK03517.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_bf_inoc_scaffold_358_curated_19
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21444..21920)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XR59_FLAIG
Uncharacterized protein {ECO:0000313|EMBL:KIC63869.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_358_curated_20
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22105..22962)
DNA (858bp) protein (286aa)
ATP synthase subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
ATP synthase gamma chain n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4E5_FLAB3
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
SCNpilot_bf_inoc_scaffold_358_curated_21
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23047..24624)
DNA (1578bp) protein (526aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
ATP synthase F0F1 subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]
ATP synthase subunit alpha n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4E4_FLAB3
SCNpilot_bf_inoc_scaffold_358_curated_22
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24643..25182)
DNA (540bp) protein (180aa)
ATP synthase subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]
ATP synthase subunit delta n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4E3_FLAB3
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_bf_inoc_scaffold_358_curated_23
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25185..25682)
DNA (498bp) protein (166aa)
ATP synthase subunit B (EC:3.6.3.14); K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4E2_FLAB3
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_bf_inoc_scaffold_358_curated_24
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26025..27158)
DNA (1134bp) protein (378aa)
ATP synthase subunit A (EC:3.6.3.14); K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14]
ATP synthase subunit a n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4E0_FLAB3
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_bf_inoc_scaffold_358_curated_25
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27288..27713)
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4D9_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA90761.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_358_curated_26
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27697..27972)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4D8_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA90762.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_358_curated_27
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


28112..29482
DNA (1371bp) protein (457aa)
Signal recognition particle protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4D6_FLAB3
Signal recognition particle, subunit Ffh SRP54; K03106 signal recognition particle subunit SRP54
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_358_curated_28
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29576..30187)
DNA (612bp) protein (204aa)
Uncharacterized protein n=4 Tax=Riemerella anatipestifer RepID=E4TB76_RIEAD
Membrane protein {ECO:0000313|EMBL:KIC63879.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_358_curated_29
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30319..30870)
DNA (552bp) protein (184aa)
Lipid A 3-O-deacylase (PagL) n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CPJ9_9FLAO
Opacity protein {ECO:0000313|EMBL:KEY19970.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_358_curated_30
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31021..31980)
DNA (960bp) protein (320aa)
Phosphate starvation-inducible protein PhoH, predicted ATPase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4D1_FLAB3
phosphate starvation-inducible protein PhoH, ATPase; K06217 phosphate starvation-inducible protein PhoH and related proteins
Phosphate starvation-inducible protein PhoH, predicted ATPase {ECO:0000313|EMBL:ACU07269.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Displaying items 1-30 of 127 in total

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