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SCNpilot_bf_inoc_scaffold_288_curated_26

Organism: scnpilot_dereplicated_Chryseobacterium_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(22893..23975)

Top 3 Functional Annotations

Value Algorithm Source
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 358.0
  • Bit_score: 655
  • Evalue 3.70e-185
GDP-D-mannose dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 358.0
  • Bit_score: 582
  • Evalue 6.80e-164
GDP-mannose 4,6-dehydratase n=1 Tax=Flavobacterium sp. CF136 RepID=J3C6N8_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 355.0
  • Bit_score: 651
  • Evalue 4.90e-184

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Taxonomy

Flavobacterium sp. EM1308 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1083
ATGAGCAAAGTAGCATTAATCACAGGAATTACCGGGCAAGATGGTTCGTATTTAGCTGAATTGTTATTAGAAAAAGGATATATGGTGCATGGTATCAAAAGAAGAGCATCTTCTTTTAATACCCAAAGAATTGATCATTTATATGTTGATCAGCATGAAAATCATGTGAATTTTAAGCTTCATTATGGTGATCTTACTGATTCTACCAATATTATCAGGATCATCCAAGAAGTGCAGCCGGATGAAATTTACAATTTGGGAGCCATGTCTCACGTTAAAGTATCTTTTGATTCACCTGAATATGTTGCTAATGTAGATGGAATTGGAACTTTGAGAATTCTCGAAGCGGTGAGGATTTTAGGTTTAGAAAAGAAAACAAGAATTTACCAAGCTTCTACATCAGAATTATATGGAGGCCTAGCTGAAAACAAAAATGCAAGAGGTTTCTATGATGAAAATTCACCTTTTTACCCAAGATCTCCTTATGGTGCTGCAAAAATTTATGGTTTTTGGATCACTAAAAACTATAGAGAAGCTTATCATATGTTTGCCTGCAATGGTATTTTGTTCAATCACGAATCCCCAAGAAGAGGCGAAACGTTTGTTACTCGAAAGATAACAATGGCTACCGCGGCAATTGCCCTTGGAAAGCAGGAATGTTTGTATTTAGGAAATCTAAATTCTCAAAGAGACTGGGGGCATGCAAAAGATTATGTAGAAGCCATGTGGAGAATTTTGCAGCAAGACAAACCAGAAGATTTTGTTATAGCAACTGGTGTTACAACATACATTAGAGATTTTGTTAAAATGTCTTTTGCGGAAGTTGGAATCGAATTAGAATTCAAAGGAAGCGAAGAAAGCGAAATTGCAGTTGTAAAATCTTGCAGCAATCCAGATTATCAATTAGAAATTGGTAAAGTAGTAGTACGGGTAGATCCACAATATTATAGGCCCACTGAGGTTGACCTTCTTATTGGTGACCCAACTAAATCCAAAGAACAACTTGGTTGGAGACCACAATATGATTTGCAAGCATTAGTGAAAGATATGGTGAGTTCAGATTTGAAACAGGTTAAAAAATAG
PROTEIN sequence
Length: 361
MSKVALITGITGQDGSYLAELLLEKGYMVHGIKRRASSFNTQRIDHLYVDQHENHVNFKLHYGDLTDSTNIIRIIQEVQPDEIYNLGAMSHVKVSFDSPEYVANVDGIGTLRILEAVRILGLEKKTRIYQASTSELYGGLAENKNARGFYDENSPFYPRSPYGAAKIYGFWITKNYREAYHMFACNGILFNHESPRRGETFVTRKITMATAAIALGKQECLYLGNLNSQRDWGHAKDYVEAMWRILQQDKPEDFVIATGVTTYIRDFVKMSFAEVGIELEFKGSEESEIAVVKSCSNPDYQLEIGKVVVRVDPQYYRPTEVDLLIGDPTKSKEQLGWRPQYDLQALVKDMVSSDLKQVKK*