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SCNpilot_bf_inoc_scaffold_288_curated

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_288_curated_1
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2..1231)
DNA (1230bp) protein (410aa)
Beta-lactamase (EC:3.5.2.6)
Beta-lactamase {ECO:0000313|EMBL:ACU08138.1}; EC=3.5.2.6 {ECO:0000313|EMBL:ACU08138.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Beta-lactamase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X125_FLAB3
SCNpilot_bf_inoc_scaffold_288_curated_2
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1294..2652
DNA (1359bp) protein (453aa)
Orotate phosphoribosyltransferase (EC:2.4.2.10); K13421 uridine monophosphate synthetase [EC:2.4.2.10 4.1.1.23]
Orotidine 5'-phosphate decarboxylase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZF8_9FLAO
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:KIA87902.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_bf_inoc_scaffold_288_curated_3
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2756..3466
DNA (711bp) protein (237aa)
dithiol-disulfide isomerase (EC:5.3.4.1)
Dithiol-disulfide isomerase {ECO:0000313|EMBL:ACU07108.1}; EC=5.3.4.1 {ECO:0000313|EMBL:ACU07108.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Dithiol-disulfide isomerase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3X0_FLAB3
SCNpilot_bf_inoc_scaffold_288_curated_4
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3553..4125
DNA (573bp) protein (191aa)
YceI like family protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3W8_FLAB3
hypothetical protein
YceI like family protein {ECO:0000313|EMBL:ACU07106.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_288_curated_5
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4181..5032)
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3W6_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU07104.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_288_curated_6
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5102..7921
DNA (2820bp) protein (940aa)
Aminopeptidase N n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3W5_FLAB3
Aminopeptidase N {ECO:0000313|EMBL:KIA87906.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
aminopeptidase
SCNpilot_bf_inoc_scaffold_288_curated_7
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8001..8858)
DNA (858bp) protein (286aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1Q7_FLAB3
SCNpilot_bf_inoc_scaffold_288_curated_8
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(8855..9316)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K300_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL67633.1}; Flags: Precursor;; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
SCNpilot_bf_inoc_scaffold_288_curated_9
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9318..9629)
DNA (312bp) protein (104aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase n=1 Tax=Riemerella columbina RepID=UPI0003671AE8
SCNpilot_bf_inoc_scaffold_288_curated_10
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9574..10371)
DNA (798bp) protein (266aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=883098 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum CCUG 30536.;"
dTDP-D-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1LUT2_9FLAO
SCNpilot_bf_inoc_scaffold_288_curated_11
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10381..10926)
DNA (546bp) protein (182aa)
dtdp-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4S6_9FLAO
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:KFF29394.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
SCNpilot_bf_inoc_scaffold_288_curated_12
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10928..11518)
DNA (591bp) protein (197aa)
Lipid carrier : UDP-N-acetylgalactosaminyltransferase {ECO:0000313|EMBL:AIL47052.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
Possible glycosyltransferase id=4533308 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
wcfS; undecaprenyl-phosphate galactose phosphotransferase
SCNpilot_bf_inoc_scaffold_288_curated_13
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11518..12735)
DNA (1218bp) protein (406aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GQK9_9SPHI
Capsular biosynthesis protein {ECO:0000313|EMBL:KGO11915.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
DegT/DnrJ/EryC1/StrS aminotransferase
SCNpilot_bf_inoc_scaffold_288_curated_14
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(12745..13323)
DNA (579bp) protein (193aa)
Putative uncharacterized protein id=3759953 bin=GWF2_Bacteroidetes_33_38 species=Polaribacter irgensii genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_bf_inoc_scaffold_288_curated_15
unknown

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13571..13870
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_288_curated_16
unknown

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13857..14702
DNA (846bp) protein (282aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_288_curated_17
unknown

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14683..15156
DNA (474bp) protein (158aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_288_curated_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15183..16385)
DNA (1203bp) protein (401aa)
Putative glycosyltransferase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64PC5_BACFR
glycosyltransferase rbh
Putative glycosyltransferase {ECO:0000313|EMBL:BAD50656.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
SCNpilot_bf_inoc_scaffold_288_curated_19
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16504..17250)
DNA (747bp) protein (249aa)
alpha-L-Rha alpha-1,3-L-rhamnosyltransferase (EC:2.4.1.-)
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase {ECO:0000313|EMBL:ACU08378.1}; EC=2.4.1.- {ECO:0000313|EMBL:ACU08378.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1R5_FLAB3
SCNpilot_bf_inoc_scaffold_288_curated_20
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17329..18558
DNA (1230bp) protein (410aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1R6_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08379.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_288_curated_21
unknown

Not on your lists

18558..18674
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_288_curated_22
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18648..19487)
DNA (840bp) protein (280aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1R7_FLAB3
glycosyl transferase, group 2 family protein
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:ACU08380.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_288_curated_23
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19475..20533)
DNA (1059bp) protein (353aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1R8_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08381.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_288_curated_24
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20549..21805)
DNA (1257bp) protein (419aa)
Polysaccharide biosynthesis protein n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S1I7_DESTD
Strain DSM 12611 Contig18, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51210.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
polysaccharide biosynthesis protein; K03328 polysaccharide transporter, PST family
SCNpilot_bf_inoc_scaffold_288_curated_25
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21805..22881)
DNA (1077bp) protein (359aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
Nucleoside-diphosphate-sugar epimerases (EC:1.1.1.271)
GDP-L-fucose synthase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003644FBD
SCNpilot_bf_inoc_scaffold_288_curated_26
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(22893..23975)
DNA (1083bp) protein (361aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
GDP-D-mannose dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase n=1 Tax=Flavobacterium sp. CF136 RepID=J3C6N8_9FLAO
SCNpilot_bf_inoc_scaffold_288_curated_27
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(23985..24980)
DNA (996bp) protein (332aa)
ATP phosphoribosyltransferase n=1 Tax=Algoriphagus machipongonensis RepID=A3HRP9_9BACT
Mannose-1-phosphate guanylyltransferase (GDP) {ECO:0000313|EMBL:AIL47068.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
mannose-1-phosphate guanylyltransferase
SCNpilot_bf_inoc_scaffold_288_curated_28
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(24980..25321)
DNA (342bp) protein (114aa)
Mannose-6-phosphate isomerase, type 2 n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2C009_9FLAO
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:KFF00348.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
mannose 6-phosphate isomerase
SCNpilot_bf_inoc_scaffold_288_curated_29
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25341..27701)
DNA (2361bp) protein (787aa)
Tyrosine-protein kinase wzc (EC:2.7.10.2)
Tyrosine-protein kinase wzc {ECO:0000313|EMBL:ACU08387.1}; EC=2.7.10.2 {ECO:0000313|EMBL:ACU08387.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Tyrosine-protein kinase wzc n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1S4_FLAB3
SCNpilot_bf_inoc_scaffold_288_curated_30
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27728..28525)
DNA (798bp) protein (266aa)
Polysaccharide export outer membrane protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1S5_FLAB3
Sugar transporter {ECO:0000313|EMBL:KIA83858.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
polysaccharide export outer membrane protein; K01991 polysaccharide export outer membrane protein
Displaying items 1-30 of 66 in total

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