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SCNpilot_bf_inoc_scaffold_229_curated_6

Organism: scnpilot_dereplicated_Chryseobacterium_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 5843..6133

Top 3 Functional Annotations

Value Algorithm Source
Ribosome hibernation protein YhbH n=3 Tax=Elizabethkingia RepID=H0KPR8_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 96.0
  • Bit_score: 155
  • Evalue 2.30e-35
RNA polymerase subunit sigma-54 {ECO:0000313|EMBL:KEY18688.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 96.0
  • Bit_score: 171
  • Evalue 4.30e-40
Ribosome hibernation protein YhbH; K05808 putative sigma-54 modulation protein similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 96.0
  • Bit_score: 154
  • Evalue 2.10e-35

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Taxonomy

Chryseobacterium antarcticum → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 291
ATGAAAATTAAAGTACAGTCAATGGGATTGACGCCTCATGCACCGCTTGAAGAATATTTAGAAAAAAAATTAAGCAAGCTCGAAACATTTTATGATAAGATCCATGGTTGCCAAGTTTATCTGAAGGTGGAAAATACCGCAGATAAAGAAAATAAAACTGCAGAGATCAAGTTGGAAGTTCCAGGCGATGATATTGTTGTGAAAAAGACGACGGCTTCTTTTGAAGAAAGTGTTGACCTATGTGTGGAAACTGCTAAAAAGCTGCTAATCAAGAAAAAAGAAATGGCATAA
PROTEIN sequence
Length: 97
MKIKVQSMGLTPHAPLEEYLEKKLSKLETFYDKIHGCQVYLKVENTADKENKTAEIKLEVPGDDIVVKKTTASFEESVDLCVETAKKLLIKKKEMA*