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SCNpilot_bf_inoc_scaffold_229_curated

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Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_229_curated_1
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2..871
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Elizabethkingia anophelis RepID=L8K6I5_9FLAO
Glycosyl transferase {ECO:0000313|EMBL:KGO11075.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_229_curated_2
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

970..1380
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0I2_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU06868.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_229_curated_3
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1439..4594)
DNA (3156bp) protein (1052aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
ATP-dependent helicase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X052_FLAB3
ATP-dependent helicase
SCNpilot_bf_inoc_scaffold_229_curated_4
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4685..4882
DNA (198bp) protein (66aa)
30S ribosomal protein S21 n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K4B2_9FLAO
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_229_curated_5
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4958..5839
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X054_FLAB3
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
Integrase, site-specific recombinase; K03733 integrase/recombinase XerC
SCNpilot_bf_inoc_scaffold_229_curated_6
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5843..6133
DNA (291bp) protein (97aa)
Ribosome hibernation protein YhbH n=3 Tax=Elizabethkingia RepID=H0KPR8_9FLAO
RNA polymerase subunit sigma-54 {ECO:0000313|EMBL:KEY18688.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Ribosome hibernation protein YhbH; K05808 putative sigma-54 modulation protein
SCNpilot_bf_inoc_scaffold_229_curated_7
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6760..7443
DNA (684bp) protein (228aa)
Response regulator receiver domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYW9_9FLAO
Transcriptional regulator {ECO:0000313|EMBL:KFF16883.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
two component transcriptional regulator, winged helix family
SCNpilot_bf_inoc_scaffold_229_curated_8
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7440..8810
DNA (1371bp) protein (457aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NQI8_9SPHI
integral membrane sensor signal transduction histidine kinase
SCNpilot_bf_inoc_scaffold_229_curated_9
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8885..10123
DNA (1239bp) protein (413aa)
Outer membrane efflux protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CH35_ELIME
Transporter {ECO:0000313|EMBL:KIA88171.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
SCNpilot_bf_inoc_scaffold_229_curated_10
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10128..11216
DNA (1089bp) protein (363aa)
Cation efflux system protein CzcB n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CH16_ELIME
RND transporter {ECO:0000313|EMBL:KIA88122.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
czcB; cation efflux system protein CzcB; K15727 cobalt-zinc-cadmium resistance protein CzcB
SCNpilot_bf_inoc_scaffold_229_curated_11
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11232..14330
DNA (3099bp) protein (1033aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Chryseobacterium sp. CF314 RepID=J2SV70_9FLAO
Cation transporter {ECO:0000313|EMBL:KIA88121.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
czcA; cation efflux system protein CzcA; K15726 cobalt-zinc-cadmium resistance protein CzcA
SCNpilot_bf_inoc_scaffold_229_curated_12
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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14543..15730
DNA (1188bp) protein (396aa)
elongation factor Tu n=1 Tax=Riemerella columbina RepID=UPI00036BE57A
hypothetical protein
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=34085 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (Moraxella anatipestifer).;"
SCNpilot_bf_inoc_scaffold_229_curated_13
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15869..16072
DNA (204bp) protein (68aa)
Protein translocase subunit SecE n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X057_FLAB3
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein; K03073 preprotein translocase subunit SecE
SCNpilot_bf_inoc_scaffold_229_curated_14
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16088..16630
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X058_FLAB3
transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_229_curated_15
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16716..19001
DNA (2286bp) protein (762aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XR50_FLAIG
Uncharacterized protein {ECO:0000313|EMBL:KIA88117.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_229_curated_16
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


19349..19792
DNA (444bp) protein (148aa)
50S ribosomal protein L11 n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYY1_9FLAO
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
50S ribosomal protein L11
SCNpilot_bf_inoc_scaffold_229_curated_17
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


19804..20496
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=Riemerella columbina RepID=UPI0003757786
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
SCNpilot_bf_inoc_scaffold_229_curated_18
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


20514..21122
DNA (609bp) protein (203aa)
50S ribosomal protein L10 n=1 Tax=Chryseobacterium sp. CF314 RepID=J2SV59_9FLAO
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
SCNpilot_bf_inoc_scaffold_229_curated_19
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


21209..21577
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12 n=4 Tax=Riemerella anatipestifer RepID=E4TD11_RIEAD
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
SCNpilot_bf_inoc_scaffold_229_curated_20
Chryseobacterium haifense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22057..25884
DNA (3828bp) protein (1276aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=421525 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium haifense.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Chryseobacterium haifense RepID=J9ZVS7_9FLAO
SCNpilot_bf_inoc_scaffold_229_curated_21
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25981..27210
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYS3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF30233.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_229_curated_22
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27242..27496
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:GAE62921.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
Uncharacterized protein id=2493570 bin=GWF1_Flavobacteria_32_7 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
SCNpilot_bf_inoc_scaffold_229_curated_23
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27435..28388
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EU58_EMTOG
Uncharacterized protein {ECO:0000313|EMBL:GAE62921.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_229_curated_24
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28385..29989
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0P2X8_WEEVC
Uncharacterized protein {ECO:0000313|EMBL:CEJ70725.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_229_curated_25
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30007..34272
DNA (4266bp) protein (1422aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000256|RuleBase:RU004279};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta' n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X064_FLAB3
SCNpilot_bf_inoc_scaffold_229_curated_26
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34378..34683
DNA (306bp) protein (102aa)
Uncharacterized protein n=5 Tax=Riemerella anatipestifer RepID=E4TD19_RIEAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD56688.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;"
SCNpilot_bf_inoc_scaffold_229_curated_27
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34865..35359
DNA (495bp) protein (165aa)
SNase-like nuclease n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M4L7_GRAFK
Uncharacterized protein {ECO:0000313|EMBL:KEY18722.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
SNase-like nuclease
SCNpilot_bf_inoc_scaffold_229_curated_28
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35427..36548)
DNA (1122bp) protein (374aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:3.5.4.25); K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X067_FLAB3
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:KIA88553.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_bf_inoc_scaffold_229_curated_29
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36636..37637)
DNA (1002bp) protein (334aa)
Luciferase family protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X068_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA88554.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
luciferase family protein
SCNpilot_bf_inoc_scaffold_229_curated_30
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

37782..39155
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K184_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA88598.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
Displaying items 1-30 of 109 in total

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