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SCNpilot_bf_inoc_scaffold_229_curated_17

Organism: scnpilot_dereplicated_Chryseobacterium_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 19804..20496

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Riemerella columbina RepID=UPI0003757786 similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 230.0
  • Bit_score: 420
  • Evalue 1.20e-114
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 230.0
  • Bit_score: 419
  • Evalue 2.80e-114
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 230.0
  • Bit_score: 416
  • Evalue 7.00e-114

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Taxonomy

Chryseobacterium solincola → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 693
ATGGCAAAATTAACGAAAAAGCAAAAAGAAGTGGCAAGCAAACTAGAGAAGAACAAAGTCTATAGCTTAGACGAAGCTTCTGCACTAGTAAAGGAACTGAACTACGCGAAGTTTGATGCTTCTGTAGATTTAGCAGTTAGATTGGGGGTAGATCCTAGAAAGGCCAACCAAATGGTAAGAGGTGTTGTATCTCTTCCGCATGGTACCGGTAAAGATGTGAAAGTTCTTGCATTGGTTACGCCTGAGAAAGAAGCGGAAGCCAAAGAAGCGGGAGCAGATTACGTAGGTCTAGATGAATATCTTGATAAAATAAAAGGCGGTTGGACAGATGTGGACGTTATCGTTACCATGCCAGCTGTTATGGGTAAATTAGGACCATTGGGTAGAGTATTAGGACCAAGAGGTTTGATGCCGAATCCAAAATCAGGAACCGTAACGATGGAAATCGGGAAAGCAGTTTCTGAAGTAAAATCAGGTAAAATTGATTTTAAAGTAGATAAATACGGTATTATTCATGCAGGAATCGGGAAAGTTTCTTTCGAACCAGCTAAAATCAAAGAAAACGCTCAGGAATTGATCCAGACTTTGGTTAAGTTGAAACCAACTGCTGCAAAAGGAGTTTATGTGAAGTCAATTTATTTGTCTTCTACCATGAGCCCTGGAATCGCAATCGATACCAAATCTGTAAACTAA
PROTEIN sequence
Length: 231
MAKLTKKQKEVASKLEKNKVYSLDEASALVKELNYAKFDASVDLAVRLGVDPRKANQMVRGVVSLPHGTGKDVKVLALVTPEKEAEAKEAGADYVGLDEYLDKIKGGWTDVDVIVTMPAVMGKLGPLGRVLGPRGLMPNPKSGTVTMEIGKAVSEVKSGKIDFKVDKYGIIHAGIGKVSFEPAKIKENAQELIQTLVKLKPTAAKGVYVKSIYLSSTMSPGIAIDTKSVN*