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SCNpilot_bf_inoc_scaffold_229_curated_25

Organism: scnpilot_dereplicated_Chryseobacterium_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 30007..34272

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000256|RuleBase:RU004279};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 999.99
  • Bit_score: 2651
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 999.99
  • Bit_score: 2635
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X064_FLAB3 similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 999.99
  • Bit_score: 2635
  • Evalue 0.0

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Taxonomy

Chryseobacterium solincola → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 4266
ATGTCAAATAAAAATAAATCAAGCAAATTTAGTAAGATCGCGATCGGTCTGGCTTCACCAGAATCCATCCTTCAGGAGTCAAGAGGAGAGGTGCTGAAGCCCGAAACCATCAACTACAGAACGCACAAACCCGAAAGAGACGGTTTGTTCTGTGAAAAAATATTCGGTCCTGTAAAGGATTACGAATGTGCCTGCGGAAAATACAAACGTATCCGTTATAAAGGTATCGTTTGCGACCGTTGTGGTGTAGAAGTTACCGAGAAAAAAGTACGTCGTGAGCGTATTGGTCACATTAATCTTGTGGTTCCTATTGCTCACATCTGGTATTTCCGTTCGTTGCCGAATAAAATTGGTTACTTGTTAGGATTGCCTTCCAAGAAATTGGATATGATTATCTACTATGAAAGATATGTAGTTATTCAGCCAGGTATCGCTAAAAAGGCAGATGGTTCCGATTTCGATGATATGGAATTTTTAACAGAAGAAGAGTATCTTGATATTTTGGATACGCTTCCTGTAGAAAACCAATATCTTGACGATTCGGATCCCAATAAATTTGTGGCAAAAATGGGTGCAGAGGCCGTTGAAGGATTGCTGAAAAGAATCGATCTGGATGCATTGTCTTTCGACCTTCGTCACAAAGCACACAACGAATCATCAAAGCAAAGAAGAACAGAAGCGCTGAAAAGACTGAACGTGGTAGAAGCACTTCGTGGTGCCAACACCAGAATGATCAATAAACCAGAATGGATGATCATGCGTGTACTTCCAGTTATTCCACCAGAATTAAGACCATTGGTTCCGTTGGATGGAGGACGTTTTGCAACCTCAGACTTGAATGATCTTTACCGTCGTGTGATCATCAGAAATAACCGTTTGAAAAGATTACTGGAAATTAAAGCTCCAGAAGTGATCTTGAGAAACGAAAAACGTATGCTTCAAGAATCTGTAGATTCGTTGTTCGATAACACCAGAAAATCTTCTGCTGTAAAATCGGAATCCAACAGACCATTGAAATCACTTTCTGATTCTTTGAAAGGTAAACAAGGTCGTTTCCGTCAGAACTTATTAGGTAAGCGTGTTGACTATTCAGCTCGTTCGGTAATTGTTGTTGGTCCAAACCTACAACTTCACGAATGTGGTATTCCTAAAGATATGGCAGCCGAATTGTACAAACCATTCATCATCAGAAAATTGATTGAGAGAGGAATTGTAAAAACGGTAAAATCAGCAAAAAGAATCATCGATAGAAAAGAACCTGTCGTTTATGATATCCTTGAAAACGTGATGAAAGGTCACCCAGTTCTTCTGAACCGTGCGCCTACGCTTCACCGTTTGGGTATCCAGGCATTCCAGCCGAAGATGATTGAAGGCAAAGCCATCCAACTTCACCCATTGGTAACAACGGCATTCAACGCCGATTTCGATGGTGACCAGATGGCGGTGCACTTACCTTTGGGCCCAGAAGCTATTTTGGAAGCTCAGTTATTGATGTTAGGTTCTCAAAATATCCTTAACCCAGCGAATGGTTCTCCAATTACCGTACCTTCTCAGGACATGGTATTGGGGCTATACTTCATGACGAAACAGTTGGATTCTACTGATGAGGTTAAAGTGAAAGGAGAAGGACTTGCTTTCTACTCTCCGGAAGAGGTAGAAATCGCTTATGCAGAAGGACAAGTTTCTCTTAACGCAAAAGTAAGATGTAAACTTCCTGTAAAAGAAGAAGGAGAATTGGTGATTCGCCTTATCGAAACTACTGTTGGCCGAATTTTATTCAACCAAATCGTGCCAAAAGAAGTTGGTTTCGTTAACGAATTGCTTACCAAAAAATCTTTGAGAAATGTAATCGGTAGAATTCTTGCAGACACGGACTTCCCAACAACAGTGAAGTTCTTGGATGATATGAAAAATCTAGGATACTCTAACGCATTCAAAGGAGGACTTTCGTTCTCATTGGGCGATATTGTAATTCCAGCCGAGAAGAAAAAAATGATCGCTACCGCAGTAGAAAATGTGGATGAAATTAAAGCGAACTATAACATGGGTCTTATCACCGATACCGAAAGATACAACCAGGTAATCGACGTTTGGACCAATACCAACGCAGGACTAACCGAGATGATTATGAGCAGAATGAAAACCGACCAAGGTGGGTTCAACTCTGTTTATATGATGCTTGATTCCGGGGCGAGGGGTTCTAAAGAACAGATTCGTCAGTTATCCGGAATGAGAGGTTTGATGGCCAAACCACAAAAAGCCGGTTCTACAGGAGCAGAGATCATCGAAAACCCGATTGTGGCGAACTTTAAAGAGGGACTTTCCATTTTGGAATACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTTGCGGATACCGCACTTAAAACCGCCGATGCTGGTTACTTAACCAGAAGATTGGTAGACGTTGCACAAGATGTTATCATTACAGAAGACGATTGTGGCACTTTAAGAGGTACCGAAATTACGCCATTGAAGAAAAACGACGAAATCGTTGAGAAAATTTCTGAAAGAATCTTGGGTAGAGTTTCTCTGCACAACATTTATCATCCAGAAACCGACGAAATCATCATGGAAGCAGATACACTGATTGATGAAGTTTATGCAAAACAAATCGAGGAAGCAGGTATTGAAGTGGTAGAAGTTCGTTCTCCATTAACCTGCGAAGCCAAAAAAGGAATTTGTGCAGCATGTTATGGTAGAAACTTAGCGACGGGTAAAACAATTCACATGGGTGAAGCTGTAGGGGTAATTGCCGCTCAGTCCATCGGTGAACCAGGAACACAGTTGACGCTTAGAACCTTCCACCAAGGGGGAACTGCAGGTAACGTTTCGGTGAATCCGTTTATTGAAGCAAGAAGAGATGGTATCGTAGAAATGGACGAAGTGCGTACCGTAACTTCTGAAAACGAAGAAGGTAAGAAAGCAGAAATCCTTGTGTCACGTTCTACAGAATTCCGTTTGGTAGCAGATAATTCGACAAGAACACCATTGATGGTAGCCAACGTTCCTTATGGTTCCGAAATCTTCGTGAAGCCGGGCGAAAAGGTGAAAAAAGGTGATATGATCGCCAAATGGGATCCTTATAACGCGGTAATTATTGCAGAAACTTCTGGTAAAGTAGAATACGAAGATATTATTCAGGGTATTTCATTCCAGTTAGAAATTGACGAGCAAACCGGTTTCGAAGAAAAAGTAATCTCCGAATCCAGAAATAAAAAAGCAGTACCAACGCTGAAAGTGGTTGATGCCAAAGGCGTTGAGCAGAAAGCATACAATTTACCGGTTGGTGCCCACTTAATGGTAAACGATGGTGAGAAAATTAAGGCAGGTAAAGTTTTGATCAAGATCCCTAGAAAATCTGCGAAAGCAGGGGATATTACCGGTGGTTTACCAAGGGTAACCGAATTGTTCGAAGCAAGAAACCCATCAAATCCAGCGGTTGTTACAGAAATCGACGGGGTAGTTTCTTACGGTAAAATTAAAAGAGGTAACCGCGAATTGATCGTGGAAGCTAAAACCGGGGAAATTTCTAAGTATTTGGTGAAACTATCCAACCAAATTTTGGTGCAGGAGAACGACTTCGTGAGAGCAGGTTCGCCACTTTCTGATGGTTCCATTACGCCAGACGATATCCTTAAAATTAAAGGGCCAACTGCAGTACAGGAATATCTTGTGAACGAAATCCAAGAGGTTTACCGTTTGCAAGGGGTGAAAATTGATGACAAACATTTCGAAATCATCGTTCGTCAGATGATGACTAAAGTAGAAATTGTTGATGGTGGAGATACCCAGTTCTTGGAAGGTGCATTGGAGCACAAATACGACTTCTTAGAAGAAAACAACAGAGTTTTCGGTCTAAAAGTAGTTGTAGAAGCTGGAGATTCTAAAGAATTTAAACCAGGACAAATGATCACCGCAAGAGAGTTAAGAGACGAGAACTCTAAACTGAAACGCGAAGATCTGCAATTGGTTGAAGTTCGTGAGGCACTTCCTGCAACGGCAACTCCGGTGCTTCAAGGTATTACCAGAGCGGCATTGCAAACCAAATCGTTCATGTCGGCTGCATCATTCCAGGAAACTACAAAAGTACTGAACGAAGCTGCGGTTTCCGGTAAAATCGATTACCTTGGTGGTCTTAAAGAAAACGTTATCGTAGGACACAGAATTCCTGCAGGTACCGGTCTTAAAGATTACCAAAGCATCATCGTCGGTTCTAAAAAAGAATTCGAAGACATTAACTAA
PROTEIN sequence
Length: 1422
MSNKNKSSKFSKIAIGLASPESILQESRGEVLKPETINYRTHKPERDGLFCEKIFGPVKDYECACGKYKRIRYKGIVCDRCGVEVTEKKVRRERIGHINLVVPIAHIWYFRSLPNKIGYLLGLPSKKLDMIIYYERYVVIQPGIAKKADGSDFDDMEFLTEEEYLDILDTLPVENQYLDDSDPNKFVAKMGAEAVEGLLKRIDLDALSFDLRHKAHNESSKQRRTEALKRLNVVEALRGANTRMINKPEWMIMRVLPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLLEIKAPEVILRNEKRMLQESVDSLFDNTRKSSAVKSESNRPLKSLSDSLKGKQGRFRQNLLGKRVDYSARSVIVVGPNLQLHECGIPKDMAAELYKPFIIRKLIERGIVKTVKSAKRIIDRKEPVVYDILENVMKGHPVLLNRAPTLHRLGIQAFQPKMIEGKAIQLHPLVTTAFNADFDGDQMAVHLPLGPEAILEAQLLMLGSQNILNPANGSPITVPSQDMVLGLYFMTKQLDSTDEVKVKGEGLAFYSPEEVEIAYAEGQVSLNAKVRCKLPVKEEGELVIRLIETTVGRILFNQIVPKEVGFVNELLTKKSLRNVIGRILADTDFPTTVKFLDDMKNLGYSNAFKGGLSFSLGDIVIPAEKKKMIATAVENVDEIKANYNMGLITDTERYNQVIDVWTNTNAGLTEMIMSRMKTDQGGFNSVYMMLDSGARGSKEQIRQLSGMRGLMAKPQKAGSTGAEIIENPIVANFKEGLSILEYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVIITEDDCGTLRGTEITPLKKNDEIVEKISERILGRVSLHNIYHPETDEIIMEADTLIDEVYAKQIEEAGIEVVEVRSPLTCEAKKGICAACYGRNLATGKTIHMGEAVGVIAAQSIGEPGTQLTLRTFHQGGTAGNVSVNPFIEARRDGIVEMDEVRTVTSENEEGKKAEILVSRSTEFRLVADNSTRTPLMVANVPYGSEIFVKPGEKVKKGDMIAKWDPYNAVIIAETSGKVEYEDIIQGISFQLEIDEQTGFEEKVISESRNKKAVPTLKVVDAKGVEQKAYNLPVGAHLMVNDGEKIKAGKVLIKIPRKSAKAGDITGGLPRVTELFEARNPSNPAVVTEIDGVVSYGKIKRGNRELIVEAKTGEISKYLVKLSNQILVQENDFVRAGSPLSDGSITPDDILKIKGPTAVQEYLVNEIQEVYRLQGVKIDDKHFEIIVRQMMTKVEIVDGGDTQFLEGALEHKYDFLEENNRVFGLKVVVEAGDSKEFKPGQMITARELRDENSKLKREDLQLVEVREALPATATPVLQGITRAALQTKSFMSAASFQETTKVLNEAAVSGKIDYLGGLKENVIVGHRIPAGTGLKDYQSIIVGSKKEFEDIN*