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SCNpilot_bf_inoc_scaffold_229_curated_20

Organism: scnpilot_dereplicated_Chryseobacterium_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 22057..25884

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=421525 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium haifense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 999.99
  • Bit_score: 2455
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 999.99
  • Bit_score: 2440
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Chryseobacterium haifense RepID=J9ZVS7_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 999.99
  • Bit_score: 2455
  • Evalue 0.0

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Taxonomy

Chryseobacterium haifense → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3828
ATGAGTAAATCTAAAGCAGTCGCAAAAACTCAGGGGAACGAAAGAATCAATTTCTCCGCAGCCAAGGGGAAAATTGAAACACCTGATTTTTTGGACATTCAGATCCAGTCATTCAAAGAGTTTTTCCAGTTGGATACCCTTCCGGAGCAGAGAGTTCACGAGACCCTCTACAAAACCTTTGAAGAAAACTTTCCCATTACAGACTCCAGAAATCAGTTTGTGCTTGAGTTTCTGGACTATTTGGTAGATTCCCCGCGTTACTCGATCGACGAGTGTGTGGAGAGAGGATTAACCTATTCGGTTCCTTTAAAAGCGCGTCTTAAATTATACTGTACCGATCCTGAACATGAGGATTTCCAAACAGTGGTGCAAGATGTATATTTGGGGCCGGTTCCTTATATGACACCTTCGGGATCGTTTATCATTAATGGTGCAGAGCGTGTAATCGTTACCCAGCTTCACCGTTCACCAGGGGTTTTCTTTGGTCAAACTTATCACGCCAACGGTACCAAATTGTATTATTCCAGAATTATCCCTTTCAAAGGATCTTGGATGGAATTTACAACCGACATCAACAACGTAATGTATGCTTACATCGACCGTAAGAAAAAATTACCGTTAACAACACTTTTAAGAGCCATCGGATACGAATCCGATAAAGATATTTTGCAAATTTTCGACCTTGCTGAAGAAGTGAAAGTTTCTAAAGCAGCACTTAAAAAAGTGGAAGGTAGAACTTTGGCAGCGAGAGTTTTGAACACTTGGTTCGAAGATTTCGTAGATGAAGATACTGGTGAAGTGGTTTCTATTGAAAGAAACGAAATCATCCTGGATCGTGAAACCGTTTTGGAAAAAGAGCACTTGGATCTTATTCTTGATTCAGGGGTGAAATCAATTTTGATTCACAAAGAAAACTCCAACGAATTCTCGATCATTCAGAATACACTTCAGAAAGACCCTACCAATTCAGAAAAAGAAGCGGTAGAATATATTTATCGTCAGTTGCGTAACGCAGATCCACCAGATGAGGAAACAGCAAGAGGAATTATCGAAAAACTATTCTTCTCGGAGCAACGTTACTCTCTGGGAGAAGTAGGTCGTTACCGTTTGAACAAAAAATTGGGATTAAACATTCCGGAAAAAACCGAAGTGTTAACCAAAGAAGATATCATCTCTATCGTTCGTCACTTAATCGAATTGGTGAACTCTAAAGCAGAGGTTGATGATATTGACCACTTGTCCAACAGAAGAATTAAAACAGTTGGCGAGCAATTGGCGGGTCAGTTTGGTGTAGGTCTTTCCAGAATTGCAAGAACAATCCGTGAGAGGATGAACGTTCGTGATAATGAAATCTTCACGCCGATTGATTTGGTGAATGCCAAAACATTAACCTCAGTGATCAATTCATTCTTCGGAACCAACCAGCTTTCTCAGTTCATGGACCAAACCAATCCGCTGTCAGAAATCACGCACAAGCGTAGACTTTCTGCACTAGGACCTGGTGGTTTATCCAGAGAAAGAGCAGGTTTCGAGGTGCGTGACGTTCACCATACCCACTACGGAAGAATCTGTCCGATTGAAACGCCTGAAGGACCAAACATTGGTTTGATCTCCTCACTGGGAATTTATGCTAAAATCAATAATTTAGGATTCATCGAGACTCCTTATAGAAAAGTAGCCAACGGTAAAGTTGACCTTAAAAATCCTGCAATCTTCCTTAATGCTGAAGATGAAGAAGATAAGGTTATTGCACAGGCAAACGTTGAAATGACTGATGACGGAACCATCTCTACTGAAAGAGTTATTGCCCGACTAGATGGTGATTACCCAGTAGTGGAACCTAATGAAGTTAATTTGATTGACGTAGCACCTAACCAGATTTCTGGTATTTCGGCGTCATTAATTCCGTTCTTGGAGCATGATGATGCGAACCGTGCCTTGATGGGATCCAACATGATGCGTCAAGCGGTGCCGTTATTGAAGCCACAAGCTCCAATTGTGGGTACAGGTTTAGAGAAACAGGTTGCAACCGACTCCAGAGTATTGATTAACGCTGAAGGAAATGGAGTTGTAGAGTATGTAGATGCTGACAAAATCACCATTAAATACGAAAGAAGCGAAGACGATGATTTAGTATCATTCGAATCTGCGACCAAAAGTTATAAATTAACCAAATTCAGAAAAACCAACCAAAGTACAACCATTACTTTAAGACCAAACGTAAGGGTGGGCGACAAAGTAACCAAAGGACAAGTGCTTTGCGATGGATATGCAACAGAAAATGGTGAGCTCGCTTTGGGTAGAAACCTTACCGTGGCCTTCATGCCATGGAAAGGATACAACTTTGAGGATGCCATCGTAATCAACGAAAAAGCAGTTCGCGAAGACTGGTTTACCTCCATCCATGTTGATGAATATTCTTTGGAAGTTCGGGACACCAAACTGGGTATGGAAGAACTGACCGCCGATATTCCAAACGTTTCCGAAGAAGCCACCAAAGACTTAGACGAAAACGGTATGATCCGTATCGGTGCAGAGGTGAAACCTGGTGACATCATGATTGGTAAAATTACACCAAAAGGAGAATCTGATCCTACACCGGAAGAAAAACTTCTTAGAGCGATCTTCGGTGATAAAGCTGGCGATGTGAAAGATGCTTCTTTGAAAGCGGATTCATCGTTAAGAGGGGTGGTGATCAACAAAAAATTGTTCTCAAGAAACATTAAGGACAAAAAGAAAAGAACAGAAGAAAAACTGAAACTTGAAGAAATCGAAAATACCTACAAGGCAAAATTCGATGAGTTAAGAGACATGCTTCTGGAAAAATTAGGAACACTGGTCAACGGTAAAACTTCTCAAGGCGTTAATAACGATTTAGACGAAGAAATTATCGGTAAAGGAGTGAAATTTACCACTAAATTACTACAAAGTGTTGAAGATTATGTAAATGTAAGTGGTTCGGATTGGACTGTTGATGCTGATAAAAATGAGCTCATCAAGCAATTGATCCATAATTACAAAATAAAATACAACGACATTCAAGGGGTTAAAAACCGTGAGAAATTTGCGATTTCCATTGGAGACGAGCTACCTGCAGGTATCATTAAGCTAGCAAAAGTTTACATCGCTAAGAAACGTAAACTAAACGTTGGAGATAAAATGGCAGGTCGTCACGGTAACAAGGGGATTGTATCACGTATCGTTCGTCAGGAAGATATGCCTTTCTTAGAAGACGGAACACCAGTAGATATCGTATTGAACCCACTTGGCGTACCTTCTCGTATGAACATCGGGCAGATCTACGAAACTGTTCTTGGATGGGCTGGTAAAAACTTAGGTCTTAAGTTCGCAACGCCAATCTTTGATGGAGCTTCTTTGGAGCAGATTACCGAATACACCGAGCAAGCAGGCGTACCTCAATTTGGTAGCACTTACCTTTATGATGGTGGTACTGGTGAGCGTTTTGCGCAACCAGCAACCGTTGGGGTCATCTACATGTTGAAGTTAGGACACATGGTTGATGATAAAATGCACGCACGTTCTATTGGACCATACTCATTGATCACGCAGCAACCTCTTGGTGGTAAAGCACAATTTGGTGGACAAAGATTTGGTGAGATGGAGGTTTGGGCACTGGAAGCATTCGGTGCATCCAATATCCTTAGAGAAATTCTTACCGTAAAATCGGATGATGTAATTGGTAGGGCGAAAACGTACGAAGCAATTGCGAAAGGAGAAGCAATGCCAGAACCAGGTATTCCGGAATCCTTCAACGTATTGCTGCATGAGTTACAAGGTCTTGGACTTGATGTAAGACTTGAGGAATAA
PROTEIN sequence
Length: 1276
MSKSKAVAKTQGNERINFSAAKGKIETPDFLDIQIQSFKEFFQLDTLPEQRVHETLYKTFEENFPITDSRNQFVLEFLDYLVDSPRYSIDECVERGLTYSVPLKARLKLYCTDPEHEDFQTVVQDVYLGPVPYMTPSGSFIINGAERVIVTQLHRSPGVFFGQTYHANGTKLYYSRIIPFKGSWMEFTTDINNVMYAYIDRKKKLPLTTLLRAIGYESDKDILQIFDLAEEVKVSKAALKKVEGRTLAARVLNTWFEDFVDEDTGEVVSIERNEIILDRETVLEKEHLDLILDSGVKSILIHKENSNEFSIIQNTLQKDPTNSEKEAVEYIYRQLRNADPPDEETARGIIEKLFFSEQRYSLGEVGRYRLNKKLGLNIPEKTEVLTKEDIISIVRHLIELVNSKAEVDDIDHLSNRRIKTVGEQLAGQFGVGLSRIARTIRERMNVRDNEIFTPIDLVNAKTLTSVINSFFGTNQLSQFMDQTNPLSEITHKRRLSALGPGGLSRERAGFEVRDVHHTHYGRICPIETPEGPNIGLISSLGIYAKINNLGFIETPYRKVANGKVDLKNPAIFLNAEDEEDKVIAQANVEMTDDGTISTERVIARLDGDYPVVEPNEVNLIDVAPNQISGISASLIPFLEHDDANRALMGSNMMRQAVPLLKPQAPIVGTGLEKQVATDSRVLINAEGNGVVEYVDADKITIKYERSEDDDLVSFESATKSYKLTKFRKTNQSTTITLRPNVRVGDKVTKGQVLCDGYATENGELALGRNLTVAFMPWKGYNFEDAIVINEKAVREDWFTSIHVDEYSLEVRDTKLGMEELTADIPNVSEEATKDLDENGMIRIGAEVKPGDIMIGKITPKGESDPTPEEKLLRAIFGDKAGDVKDASLKADSSLRGVVINKKLFSRNIKDKKKRTEEKLKLEEIENTYKAKFDELRDMLLEKLGTLVNGKTSQGVNNDLDEEIIGKGVKFTTKLLQSVEDYVNVSGSDWTVDADKNELIKQLIHNYKIKYNDIQGVKNREKFAISIGDELPAGIIKLAKVYIAKKRKLNVGDKMAGRHGNKGIVSRIVRQEDMPFLEDGTPVDIVLNPLGVPSRMNIGQIYETVLGWAGKNLGLKFATPIFDGASLEQITEYTEQAGVPQFGSTYLYDGGTGERFAQPATVGVIYMLKLGHMVDDKMHARSIGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAFGASNILREILTVKSDDVIGRAKTYEAIAKGEAMPEPGIPESFNVLLHELQGLGLDVRLEE*