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SCNpilot_bf_inoc_scaffold_524_curated

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_524_curated_1
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

comp(236..964)
DNA (729bp) protein (243aa)
type 11 methyltransferase n=1 Tax=Marinilabilia salmonicolor RepID=UPI000299EDCF
type 11 methyltransferase
Tax=GWD1_Spirochaetes_27_9_curated
SCNpilot_bf_inoc_scaffold_524_curated_2
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(978..3326)
DNA (2349bp) protein (783aa)
histidine kinase n=1 Tax=Desulfovibrio longus RepID=UPI0003B3B93E
two-component hybrid sensor and regulator
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:BAH73658.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
SCNpilot_bf_inoc_scaffold_524_curated_3
unknown

Not on your lists

comp(3336..3704)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_524_curated_4
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3728..4126)
DNA (399bp) protein (133aa)
Response regulator receiver protein n=3 Tax=Dehalobacter RepID=K4KYC2_9FIRM
response regulator receiver protein
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_bf_inoc_scaffold_524_curated_5
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4104..7187)
DNA (3084bp) protein (1028aa)
Putative sensor protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LJB2_ACEWD
putative sensor protein
Putative sensor protein {ECO:0000313|EMBL:AFA48675.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
SCNpilot_bf_inoc_scaffold_524_curated_6
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7215..8231)
DNA (1017bp) protein (339aa)
cheB5; chemotaxis response regulator protein-glutamate methylesterase 2 (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FKP8_9CLOT
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_bf_inoc_scaffold_524_curated_7
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8240..9055)
DNA (816bp) protein (272aa)
cheR3; chemotaxis protein methyltransferase CheR (EC:2.1.1.80)
Chemotaxis protein methyltransferase CheR {ECO:0000313|EMBL:AGX43390.1}; EC=2.1.1.80 {ECO:0000313|EMBL:AGX43390.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Chemotaxis protein methyltransferase CheR n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS34_CLOSA
SCNpilot_bf_inoc_scaffold_524_curated_8
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9092..10801)
DNA (1710bp) protein (570aa)
Putative methyl-accepting chemotaxis transducer protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LJB1_ACEWD
putative methyl-accepting chemotaxis transducer protein; K03406 methyl-accepting chemotaxis protein
Putative methyl-accepting chemotaxis transducer protein {ECO:0000313|EMBL:AFA48674.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
SCNpilot_bf_inoc_scaffold_524_curated_9
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10812..11306)
DNA (495bp) protein (165aa)
Chemotaxis signal transduction protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FLJ7_9CLOT
Chemotaxis signal transduction protein {ECO:0000313|EMBL:EMS70044.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
cheW; Positive regulator of CheA protein activity (CheW)
SCNpilot_bf_inoc_scaffold_524_curated_10
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11323..13422)
DNA (2100bp) protein (700aa)
cheA3; chemotaxis protein histidine kinase CheA3; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
Chemotaxis protein histidine kinase CheA3 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LJA9_ACEWD
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_bf_inoc_scaffold_524_curated_11
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13456..14592)
DNA (1137bp) protein (379aa)
Heat shock protein DnaJ domain-containing protein n=1 Tax=Clostridium sp. CAG:253 RepID=R6LTF5_9CLOT
Heat shock protein DnaJ domain-containing protein {ECO:0000313|EMBL:CDB90733.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
heat shock protein DnaJ domain-containing protein
SCNpilot_bf_inoc_scaffold_524_curated_12
Geminocystis sp. NIES-3709, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14589..17375)
DNA (2787bp) protein (929aa)
PAS domain S-box n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7ILJ0_DESMD
Sensor histidine kinase {ECO:0000313|EMBL:BAQ66564.1}; TaxID=1617448 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3709.;"
PAS domain-containing protein
SCNpilot_bf_inoc_scaffold_524_curated_13
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17606..18022
DNA (417bp) protein (139aa)
Thioesterase superfamily id=4075168 bin=GWF2_Bacteroidetes_35_48 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
SCNpilot_bf_inoc_scaffold_524_curated_14
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18107..18310)
DNA (204bp) protein (68aa)
cold-shock protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0003118058
Cold shock protein {ECO:0000313|EMBL:CDL92771.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
cspC2; cold-shock protein
SCNpilot_bf_inoc_scaffold_524_curated_15
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18507..19379)
DNA (873bp) protein (291aa)
Putative uncharacterized protein id=1773502 bin=GWE2_Clostridiales_32_10 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_bf_inoc_scaffold_524_curated_16
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19530..20627)
DNA (1098bp) protein (366aa)
UDP-galactopyranose mutase {ECO:0000313|EMBL:KFN05600.1}; EC=5.4.99.9 {ECO:0000313|EMBL:KFN05600.1};; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
glf; UDP-galactopyranose mutase; K01854 UDP-galactopyranose mutase [EC:5.4.99.9]
UDP-galactopyranose mutase n=1 Tax=Streptococcus suis R61 RepID=G5KZU7_STRSU
SCNpilot_bf_inoc_scaffold_524_curated_17
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20637..21653)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IUW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22732.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Glycosyltransferases involved in cell wall biogenesis
SCNpilot_bf_inoc_scaffold_524_curated_18
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21794..22747)
DNA (954bp) protein (318aa)
2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase {ECO:0000313|EMBL:KHF37579.1}; EC=3.7.1.14 {ECO:0000313|EMBL:KHF37579.1};; TaxID=1472719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P1XP2.;"
Peptidase S15 n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SHQ6_9BACL
hypothetical protein
SCNpilot_bf_inoc_scaffold_524_curated_19
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22922..23071
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2N433_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK30262.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_524_curated_20
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23178..23948)
DNA (771bp) protein (257aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6); K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6]
Glucosamine-6-phosphate deaminase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ATW0_9CLOT
SCNpilot_bf_inoc_scaffold_524_curated_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23948..25123)
DNA (1176bp) protein (392aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994, ECO:0000313|EMBL:KIN82110.1}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25); K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium botulinum Bf RepID=B1QPN1_CLOBO
SCNpilot_bf_inoc_scaffold_524_curated_22
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25150..25599)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum BKT015925 RepID=F4A512_CLOBO
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
SCNpilot_bf_inoc_scaffold_524_curated_23
Salimicrobium jeotgali, Salimicrobium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25608..26429)
DNA (822bp) protein (274aa)
RpiR family transcriptional regulator n=1 Tax=Salimicrobium sp. MJ3 RepID=K2G821_9BACI
RpiR family transcriptional regulator {ECO:0000313|EMBL:EKE31303.1}; TaxID=1230341 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Salimicrobium.;" source="Salimicrobium jeotgali.;"
transcriptional regulator
SCNpilot_bf_inoc_scaffold_524_curated_24
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26674..27825)
DNA (1152bp) protein (384aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4QYT9_9CLOT
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EPR09248.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein
SCNpilot_bf_inoc_scaffold_524_curated_25
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(27844..28413)
DNA (570bp) protein (190aa)
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein id=129385 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCNpilot_bf_inoc_scaffold_524_curated_26
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28665..30668)
DNA (2004bp) protein (668aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8ML99_ALKOO
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABW17916.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
SCNpilot_bf_inoc_scaffold_524_curated_27
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(30968..31927)
DNA (960bp) protein (320aa)
iron-sulfur cluster-binding protein id=1242544 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
iron-sulfur cluster-binding protein
Tax=RBG_13_Chloroflexi_51_36_curated
SCNpilot_bf_inoc_scaffold_524_curated_28
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32132..32674
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U5RTU1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY74944.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
SCNpilot_bf_inoc_scaffold_524_curated_29
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32731..32937)
DNA (207bp) protein (69aa)
XRE family transcriptional regulator n=1 Tax=Paenibacillus terrigena RepID=UPI0003635B85
Uncharacterized protein {ECO:0000313|EMBL:EJR48772.1}; TaxID=1053229 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD107.;"
transcriptional regulator
SCNpilot_bf_inoc_scaffold_524_curated_30
Gracilibacillus halophilus, Gracilibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32946..33422)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Gracilibacillus halophilus YIM-C55.5 RepID=N4WHI3_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ENH95642.1}; TaxID=1308866 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Gracilibacillus.;" source="Gracilibacillus halophilus YIM-C55.5.;"
hypothetical protein
Displaying items 1-30 of 34 in total

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