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SCNpilot_bf_inoc_scaffold_238_curated

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_238_curated_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3..311
DNA (309bp) protein (103aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCM2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEC89475.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein; K10823 oligopeptide transport system ATP-binding protein
SCNpilot_bf_inoc_scaffold_238_curated_2
unknown

Not on your lists

332..511
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_238_curated_3
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(631..2319)
DNA (1689bp) protein (563aa)
Recombinase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T8I1_9CLOT
Recombinase {ECO:0000313|EMBL:EGD49779.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
recombinase
SCNpilot_bf_inoc_scaffold_238_curated_4
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2403..2693)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000378978B
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ91351.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
SCNpilot_bf_inoc_scaffold_238_curated_5
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2686..3126)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R6D8_CLOSW
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_bf_inoc_scaffold_238_curated_6
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3563..4618)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZEJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ97096.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_238_curated_7
unknown

Not on your lists

5083..5355
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_238_curated_8
unknown

Not on your lists

5494..5664
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_238_curated_9
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

5723..6172
DNA (450bp) protein (150aa)
protein-tyrosine phosphatase; K03741 arsenate reductase [EC:1.20.4.1]
Low molecular weight phosphotyrosine protein phosphatase id=4289393 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
SCNpilot_bf_inoc_scaffold_238_curated_10
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6220..6450)
DNA (231bp) protein (77aa)
Small redox-active disulfide protein 2 n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0A2_CLOCD
small redox-active disulfide protein 2
Small redox-active disulfide protein 2 {ECO:0000313|EMBL:AEV66909.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
SCNpilot_bf_inoc_scaffold_238_curated_11
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6478..6717)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0A1_CLOCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV66908.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
SCNpilot_bf_inoc_scaffold_238_curated_12
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(6759..7313)
DNA (555bp) protein (185aa)
Putative permease id=3182905 bin=GWF2_Clostridiales_36_10 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
hypothetical protein
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_bf_inoc_scaffold_238_curated_13
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(7292..7774)
DNA (483bp) protein (161aa)
Putative permease id=3182901 bin=GWF2_Clostridiales_36_10 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
putative permease
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_bf_inoc_scaffold_238_curated_14
Desulfosporosinus sp. HMP52, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7806..8810)
DNA (1005bp) protein (335aa)
Putative permease n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W8Y0_DESOD
putative permease; K07089
Permease {ECO:0000313|EMBL:KGK92054.1}; TaxID=1487923 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. HMP52.;"
SCNpilot_bf_inoc_scaffold_238_curated_15
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8829..9182)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24NC4_DESHY
Transcriptional regulator {ECO:0000313|EMBL:KJS48726.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
hypothetical protein; K03892 ArsR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_238_curated_16
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9377..9697
DNA (321bp) protein (107aa)
Transcriptional regulator, ArsR family n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWS8_CLOSD
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CBH20893.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
SCNpilot_bf_inoc_scaffold_238_curated_17
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9698..11335
DNA (1638bp) protein (546aa)
Dehydrogenase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FPE6_CLOPA
Dehydrogenase {ECO:0000313|EMBL:ETD65746.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
NAD(FAD)-dependent dehydrogenase
SCNpilot_bf_inoc_scaffold_238_curated_18
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11332..11892
DNA (561bp) protein (187aa)
Thioredoxin n=2 Tax=Dehalobacter RepID=K4KYD0_9FIRM
Thioredoxin
Thioredoxin {ECO:0000313|EMBL:AFV04230.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
SCNpilot_bf_inoc_scaffold_238_curated_19
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11889..12581
DNA (693bp) protein (231aa)
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KJS21437.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
Putative cytochrome c biogenesis protein id=1780082 bin=GWD2_Clostridiales_32_59 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
putative c-type cytochrome biogenesis protein
SCNpilot_bf_inoc_scaffold_238_curated_20
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12600..13118
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6UA47_ETHHY
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_bf_inoc_scaffold_238_curated_21
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13146..13517
DNA (372bp) protein (124aa)
Arsenical resistance operon trans-acting repressor ArsD n=1 Tax=Bacillus coagulans 36D1 RepID=G2TMV8_BACCO
arsenical resistance operon trans-acting repressor ArsD
Arsenical resistance operon trans-acting repressor ArsD {ECO:0000313|EMBL:CEE00709.1}; TaxID=35841 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermoamylovorans.;"
SCNpilot_bf_inoc_scaffold_238_curated_22
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13519..15264
DNA (1746bp) protein (582aa)
Arsenical pump-driving ATPase {ECO:0000313|EMBL:CEE00710.1}; EC=3.6.3.16 {ECO:0000313|EMBL:CEE00710.1};; TaxID=35841 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermoamylovorans.;"
arsenite-activated ATPase ArsA; K01551 arsenite-transporting ATPase [EC:3.6.3.16]
Arsenite-activated ATPase ArsA n=1 Tax=Bacillus coagulans (strain 2-6) RepID=F7Z2M5_BACC6
SCNpilot_bf_inoc_scaffold_238_curated_23
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15300..16361
DNA (1062bp) protein (354aa)
Arsenite efflux transporter n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWS9_CLOSD
arsB; arsenite efflux transporter; K03325 arsenite transporter, ACR3 family
Arsenite efflux transporter {ECO:0000313|EMBL:CBH20894.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
SCNpilot_bf_inoc_scaffold_238_curated_24
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16387..16809
DNA (423bp) protein (141aa)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DF21_9FIRM
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:ERI94948.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
arsC; protein ArsC
SCNpilot_bf_inoc_scaffold_238_curated_25
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16937..17764
DNA (828bp) protein (276aa)
CobW/P47K family protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PNZ1_9CLOT
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:EET89069.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_238_curated_26
unknown

Not on your lists

18341..20092
DNA (1752bp) protein (584aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_238_curated_27
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20259..21098)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AVQ3_9CLOT
Membrane protein {ECO:0000313|EMBL:KGG81313.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
YitT family protein
SCNpilot_bf_inoc_scaffold_238_curated_28
Paenibacillus sp. HGF5, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21171..22112
DNA (942bp) protein (314aa)
UbiA prenyltransferase n=1 Tax=Paenibacillus vortex V453 RepID=E5YVV6_9BACL
Putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000313|EMBL:EGG32239.1}; TaxID=908341 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF5.;"
1,4-dihydroxy-2-naphthoate octaprenyltransferase
SCNpilot_bf_inoc_scaffold_238_curated_29
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22134..23735
DNA (1602bp) protein (534aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WDP1_DESOD
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AET68366.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
SCNpilot_bf_inoc_scaffold_238_curated_30
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23769..25091)
DNA (1323bp) protein (441aa)
Na+/H+ antiporter NhaC n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5DYU4_9FIRM
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:CCU78760.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643.;"
Na+/H+ antiporter NhaC
Displaying items 1-30 of 82 in total

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