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SCNpilot_bf_inoc_scaffold_50_curated

Search features with annotation key words

Displaying items 91-120 of 412 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_50_curated_91
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(117632..118618)
DNA (987bp) protein (329aa)
LplA; lipoate-protein ligase A; K03800 lipoate-protein ligase A [EC:2.7.7.63] rbh
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter kivui (Acetogenium kivui).;"
Lipoate-protein ligase A n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CUC5_THEYO
SCNpilot_bf_inoc_scaffold_50_curated_92
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

118924..119286
DNA (363bp) protein (121aa)
lactoylglutathione lyase-like lyase (EC:5.1.99.1)
Lactoylglutathione lyase-like lyase n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IU44_DESMD
Glyoxalase-like domain containing protein {ECO:0000313|EMBL:AIF49757.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
SCNpilot_bf_inoc_scaffold_50_curated_93
[Eubacterium] yurii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(119427..119909)
DNA (483bp) protein (161aa)
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EFM40103.1}; EC=1.8.4.- {ECO:0000313|EMBL:EFM40103.1};; TaxID=864565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Eubacterium] yurii subsp. margaretiae ATCC 43715.;"
Peptide-methionine (S)-S-oxide reductase MsrA / methionine-R-sulfoxide reductase MsrB multi-domain protein n=1 Tax=Eubacterium sp. AS15 RepID=J5HDL0_9FIRM
methionine-R-sulfoxide reductase
SCNpilot_bf_inoc_scaffold_50_curated_94
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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120044..120418
DNA (375bp) protein (125aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KLA1_CLOPH
GntR family transcriptional regulator; K07979 GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABX44250.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
SCNpilot_bf_inoc_scaffold_50_curated_95
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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120428..121288
DNA (861bp) protein (287aa)
Putative ABC transporter, ATP-binding protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FJ99_9CLOT
ABC transporter ATPase {ECO:0000313|EMBL:CDM70220.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
bcrA1; bacitracin transport ATP-binding protein BcrA
SCNpilot_bf_inoc_scaffold_50_curated_96
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

121290..121901
DNA (612bp) protein (204aa)
Predicted transporter protein n=2 Tax=Clostridium kluyveri RepID=A5N556_CLOK5
hypothetical protein
Predicted transporter protein {ECO:0000313|EMBL:EDK32437.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680).;"
SCNpilot_bf_inoc_scaffold_50_curated_97
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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122011..122745
DNA (735bp) protein (245aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
NAD-dependent protein deacetylase, SIR2 family; K12410 NAD-dependent deacetylase [EC:3.5.1.-]
NAD-dependent deacetylase n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002E31ED7
SCNpilot_bf_inoc_scaffold_50_curated_98
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

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122763..123554
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Acinetobacter bereziniae CIP 70.12 RepID=N9D0X8_ACIBZ
diguanylate cyclase
Tax=RBG_16_Caldithrix_48_16_curated
SCNpilot_bf_inoc_scaffold_50_curated_99
Bacillus smithii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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123573..124370
DNA (798bp) protein (266aa)
TIGR00266 family protein n=1 Tax=Bacillus smithii 7_3_47FAA RepID=G9QQW2_9BACI
TIGR00266 family protein {ECO:0000313|EMBL:EHL72197.1}; TaxID=665952 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus smithii 7_3_47FAA.;"
DUF124 domain-containing protein
SCNpilot_bf_inoc_scaffold_50_curated_100
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(124470..126041)
DNA (1572bp) protein (524aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=29339 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis subsp. kurstaki.;"
lysK; lysyl-tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase n=10 Tax=Bacillus cereus group RepID=C3EL43_BACTK
SCNpilot_bf_inoc_scaffold_50_curated_101
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(126498..126740)
DNA (243bp) protein (81aa)
Acetyltransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDG4_9CLOT
Acetyltransferase {ECO:0000313|EMBL:EOR27070.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
GNAT family acetyltransferase; K02348 ElaA protein
SCNpilot_bf_inoc_scaffold_50_curated_102
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

126899..128341
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TE76_CLOSG
Uncharacterized protein {ECO:0000313|EMBL:EDU38852.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_50_curated_103
Campylobacter jejuni, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

128381..128959
DNA (579bp) protein (193aa)
Conserved domain protein n=1 Tax=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) RepID=A7H4W4_CAMJD
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:ABS43564.1}; TaxID=360109 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 /; 269.97).;"
SCNpilot_bf_inoc_scaffold_50_curated_104
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

129067..130518
DNA (1452bp) protein (484aa)
diguanylate cyclase with PAS/PAC sensor id=7200122 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGX43160.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
SCNpilot_bf_inoc_scaffold_50_curated_105
unknown

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130632..131123
DNA (492bp) protein (164aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_50_curated_106
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

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131351..133174
DNA (1824bp) protein (608aa)
Putative uncharacterized protein id=2024231 bin=GWB2_Clostridiales_37_7 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
hypothetical protein
Tax=GWB2_Clostridiales_37_7_curated
SCNpilot_bf_inoc_scaffold_50_curated_107
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

133323..135308
DNA (1986bp) protein (662aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI000367EF86
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI92987.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
diguanylate cyclase
SCNpilot_bf_inoc_scaffold_50_curated_108
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

135889..136707
DNA (819bp) protein (273aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEQ2_9FIRM
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EEG78084.1}; Flags: Precursor;; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_50_curated_109
Plasmodium yoelii, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

Not on your lists

136704..137120
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Ajellomyces dermatitidis (strain ATCC 18188 / CBS 674.68) RepID=F2TR96_AJEDA
Uncharacterized protein {ECO:0000313|EMBL:ETB58827.1}; TaxID=1323249 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia).;" source="Plasmodium yoelii 17X.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_50_curated_110
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

137238..137816
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CVB3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA76779.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_50_curated_111
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

138034..138930
DNA (897bp) protein (299aa)
lipoate-protein ligase A; K03800 lipoate-protein ligase A [EC:2.7.7.63]
Lipoyltransferase and lipoate-protein ligase id=4716914 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Tax=GWC2_Spirochaetes_52_13_curated
SCNpilot_bf_inoc_scaffold_50_curated_112
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

138941..140026
DNA (1086bp) protein (362aa)
Pyruvate dehydrogenase E1 component subunit alpha protein {ECO:0000313|EMBL:ERJ11515.1}; EC=1.2.4.1 {ECO:0000313|EMBL:ERJ11515.1};; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
pyruvate dehydrogenase (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component subunit alpha protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2FF34_9BACT
SCNpilot_bf_inoc_scaffold_50_curated_113
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

140027..141001
DNA (975bp) protein (325aa)
Pyruvate dehydrogenase beta subunit protein {ECO:0000313|EMBL:ERJ11514.1}; EC=1.2.4.1 {ECO:0000313|EMBL:ERJ11514.1};; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
transketolase (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
Pyruvate dehydrogenase beta subunit protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2FJV7_9BACT
SCNpilot_bf_inoc_scaffold_50_curated_114
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

141012..142454
DNA (1443bp) protein (481aa)
Pyruvate dehydrogenase complex E2 component dihydrolipoamide acetyltransferase protein {ECO:0000313|EMBL:ERJ11513.1}; EC=2.3.1.12 {ECO:0000313|EMBL:ERJ11513.1};; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
hypothetical protein; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
Pyruvate dehydrogenase complex E2 component dihydrolipoamide acetyltransferase protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2E8P3_9BACT
SCNpilot_bf_inoc_scaffold_50_curated_115
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

142463..143848
DNA (1386bp) protein (462aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoyl dehydrogenase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EPG5_9FIRM
SCNpilot_bf_inoc_scaffold_50_curated_116
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

144114..145982
DNA (1869bp) protein (623aa)
Diguanylate cyclase (GGDEF) domain-containing protein,uncharacterized domain HDIG-containing protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IM41_DESMD
diguanylate cyclase
Diguanylate cyclase (GGDEF) domain-containing protein,uncharacterized domain HDIG-containing protein {ECO:0000313|EMBL:AFQ42827.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB; 13706 / S10).;"
SCNpilot_bf_inoc_scaffold_50_curated_117
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

146136..146327
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002F9B710
Uncharacterized protein {ECO:0000313|EMBL:AHM57579.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_50_curated_118
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

146336..146956
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MPS7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF56726.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
SCNpilot_bf_inoc_scaffold_50_curated_119
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

146953..147525
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002F78C19
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:AHM57581.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_50_curated_120
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

147723..148934
DNA (1212bp) protein (404aa)
Diguanylate phosphodiesterase n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LKL2_ACEWD
diguanylate phosphodiesterase; K07181 putative signal transduction protein containing EAL and modified HD-GYP domains
Diguanylate phosphodiesterase {ECO:0000313|EMBL:AFA48804.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Displaying items 91-120 of 412 in total

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