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SCNpilot_bf_inoc_scaffold_50_curated

Search features with annotation key words

Displaying items 61-90 of 412 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_50_curated_61
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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73476..75026
DNA (1551bp) protein (517aa)
S-layer domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJQ1_ALKMQ
S-layer protein
S-layer domain protein {ECO:0000313|EMBL:ABR46419.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
SCNpilot_bf_inoc_scaffold_50_curated_62

Not on your lists

comp(75100..76941)
DNA (1842bp) protein (614aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN39497.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Diguanylate cyclase (GGDEF) domain-containing protein id=1267764 bin=GWE1_Spirochaetes_32_154 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaetes_32_154 organism_group=Spirochaetes
sensory box protein
SCNpilot_bf_inoc_scaffold_50_curated_63
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(76978..78453)
DNA (1476bp) protein (492aa)
Diguanylate cyclase containing PAS/PAC sensor n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LJ02_ACEWD
diguanylate cyclase containing PAS/PAC sensor
Diguanylate cyclase containing PAS/PAC sensor {ECO:0000313|EMBL:AFA47365.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
SCNpilot_bf_inoc_scaffold_50_curated_64
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(78431..79600)
DNA (1170bp) protein (390aa)
Alcohol dehydrogenase, iron-type {ECO:0000313|EMBL:AFA47366.1}; EC=1.1.1.1 {ECO:0000313|EMBL:AFA47366.1};; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Alcohol dehydrogenase, iron-type n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LJ03_ACEWD
adh2; alcohol dehydrogenase
SCNpilot_bf_inoc_scaffold_50_curated_65
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(79769..81508)
DNA (1740bp) protein (580aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWL8_9CLOT
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EOD01578.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
mcpC1; methyl-accepting chemotaxis protein McpC
SCNpilot_bf_inoc_scaffold_50_curated_66
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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81842..83122
DNA (1281bp) protein (427aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KPX9_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX41878.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
SCNpilot_bf_inoc_scaffold_50_curated_67
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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83119..83463
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KPY0_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX41879.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
SCNpilot_bf_inoc_scaffold_50_curated_68
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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83549..84406
DNA (858bp) protein (286aa)
TIGR00297 family protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CZQ1_9FIRM
TIGR00297 family protein {ECO:0000313|EMBL:ERI90040.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_50_curated_69
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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84492..86030
DNA (1539bp) protein (513aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
Uncharacterized protein {ECO:0000313|EMBL:KGG80981.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
Carboxyl-terminal protease id=2303216 bin=GWB2_Clostridiales_37_7 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
SCNpilot_bf_inoc_scaffold_50_curated_70
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

86164..86835
DNA (672bp) protein (224aa)
Response regulator receiver n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DR76_DESRL
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:AEG60911.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
SCNpilot_bf_inoc_scaffold_50_curated_71
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

86832..87776
DNA (945bp) protein (315aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
ATP-binding region ATPase domain protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DR77_DESRL
ATP-binding protein
SCNpilot_bf_inoc_scaffold_50_curated_72
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

87883..88545
DNA (663bp) protein (221aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FXR5_9FIRM
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein
Tax=BJP_IG2069_Clostridiales_48_15
SCNpilot_bf_inoc_scaffold_50_curated_73
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

88558..91134
DNA (2577bp) protein (859aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DR79_DESRL
hypothetical protein; K02004 putative ABC transport system permease protein
Uncharacterized protein {ECO:0000313|EMBL:AEG60914.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
SCNpilot_bf_inoc_scaffold_50_curated_74
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

91260..92381
DNA (1122bp) protein (374aa)
Phenylacetate-CoA ligase protein {ECO:0000313|EMBL:ERJ12175.1}; EC=6.2.1.30 {ECO:0000313|EMBL:ERJ12175.1};; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
Phenylacetate-CoA ligase protein n=1 Tax=Haloplasma contractile SSD-17B RepID=F7Q217_9BACT
acyl-protein synthetase LuxE
SCNpilot_bf_inoc_scaffold_50_curated_75
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

92368..93663
DNA (1296bp) protein (432aa)
Phenylacetate-CoA ligase protein n=1 Tax=Haloplasma contractile SSD-17B RepID=F7Q218_9BACT
acyl-CoA reductase
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_bf_inoc_scaffold_50_curated_76
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

94107..96743
DNA (2637bp) protein (879aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52); K12373 hexosaminidase [EC:3.2.1.52]
PREDICTED: LOW QUALITY PROTEIN: mucin-5B-like, partial n=1 Tax=Capra hircus RepID=UPI0003AFE057
Uncharacterized protein {ECO:0000313|EMBL:KIL36673.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
SCNpilot_bf_inoc_scaffold_50_curated_77
unknown

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97023..97208
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_50_curated_78
unknown

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97225..99087
DNA (1863bp) protein (621aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_50_curated_79
unknown

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comp(99119..99880)
DNA (762bp) protein (254aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_50_curated_80
unknown

Not on your lists

comp(99882..100766)
DNA (885bp) protein (295aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_50_curated_81
unknown

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comp(100778..102184)
DNA (1407bp) protein (469aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_50_curated_82
unknown

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comp(102195..102701)
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_50_curated_83
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(102889..105735)
DNA (2847bp) protein (949aa)
Cell wall/surface repeat protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TNF6_ALKMQ
cell wall/surface repeat-containing protein
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_bf_inoc_scaffold_50_curated_84
unknown

Not on your lists

105979..106557
DNA (579bp) protein (193aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_50_curated_85
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

106741..108579
DNA (1839bp) protein (613aa)
Cyclic diguanylate phosphodiesterase (EAL) domain protein n=1 Tax=Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639 RepID=N1W112_9LEPT
signal transduction protein
Tax=BJP_IG2157_Clostridiales_52_13
SCNpilot_bf_inoc_scaffold_50_curated_86
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

108873..109796
DNA (924bp) protein (308aa)
LysM domain-containing protein n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A892_DESDJ
LysM domain-containing protein
LysM domain-containing protein {ECO:0000313|EMBL:AFM00177.1}; Flags: Precursor;; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
SCNpilot_bf_inoc_scaffold_50_curated_87
unknown

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110029..110286
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_50_curated_88
Peptoniphilus sp. BV3AC2, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

110464..115785
DNA (5322bp) protein (1774aa)
Leucine-rich repeat domain protein (LPXTG motif) n=2 Tax=Listeria monocytogenes RepID=J7N717_LISMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERT64012.1}; Flags: Fragment;; TaxID=1111133 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3AC2.;"
SCNpilot_bf_inoc_scaffold_50_curated_89
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(115925..116500)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A6Z1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AHM57724.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_50_curated_90
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(116671..117552)
DNA (882bp) protein (294aa)
lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8]
Lipoyl synthase {ECO:0000255|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000255|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000255|HAMAP-Rule:MF_00206}; Short=LS {ECO:0000255|HAMAP-Rule:MF_00206};; Lipoate synthase {ECO:0000255|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000255|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000255|HAMAP-Rule:MF_00206}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF)
Lipoyl synthase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=LIPA_ALKMQ rbh
Displaying items 61-90 of 412 in total

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