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SCNpilot_bf_inoc_scaffold_17_curated

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Displaying items 31-60 of 742 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_17_curated_31
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35304..36071
DNA (768bp) protein (256aa)
Cobalt ABC transporter, inner membrane subunit CbiQ n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0T2V3_SYNGF
cobalt ABC transporter inner membrane subunit CbiQ; K02008 cobalt/nickel transport system permease protein
Tax=BJP_08E140C01_Clostridiales_46_19
SCNpilot_bf_inoc_scaffold_17_curated_32
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36123..36896
DNA (774bp) protein (258aa)
ABC-type cobalt transport system, ATPase component n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F533_DESDL
cobalt ABC transporter ATPase
ABC-type cobalt transport system, ATPase component {ECO:0000313|EMBL:AGA68140.1}; Flags: Precursor;; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
SCNpilot_bf_inoc_scaffold_17_curated_33
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36964..37329
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI00037E4B47
hypothetical protein
UPF0251 protein Sgly_2508 {ECO:0000256|HAMAP-Rule:MF_00674}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
SCNpilot_bf_inoc_scaffold_17_curated_34
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37395..37682
DNA (288bp) protein (96aa)
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_bf_inoc_scaffold_17_curated_35
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37906..38817
DNA (912bp) protein (304aa)
Hypothetical integral membrane protein n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RMM3_9CLOT
Membrane protein {ECO:0000313|EMBL:EYE88614.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
membrane protein
SCNpilot_bf_inoc_scaffold_17_curated_36
Leptotrichia hofstadii, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

39023..40936
DNA (1914bp) protein (638aa)
Putative aconitate hydratase {ECO:0000313|EMBL:EEX74987.1}; EC=4.2.1.3 {ECO:0000313|EMBL:EEX74987.1};; TaxID=634994 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia hofstadii F0254.;"
aconitate hydratase; K01681 aconitate hydratase 1 [EC:4.2.1.3]
aconitate hydratase n=1 Tax=Leptotrichia wadei RepID=UPI0003748B57
SCNpilot_bf_inoc_scaffold_17_curated_37
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41019..42044
DNA (1026bp) protein (342aa)
icd; isocitrate dehydrogenase (EC:1.1.1.-); K00030 isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
isocitrate dehydrogenase n=1 Tax=Anaerococcus obesiensis RepID=UPI0002FE99AB
Isocitrate dehydrogenase (NAD(+)) {ECO:0000313|EMBL:AKA70796.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
SCNpilot_bf_inoc_scaffold_17_curated_38
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42038..43405
DNA (1368bp) protein (456aa)
methylcitrate synthase (EC:2.3.3.5); K01647 citrate synthase [EC:2.3.3.1]
Methylcitrate synthase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PY49_CLOSD
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
SCNpilot_bf_inoc_scaffold_17_curated_39
Paenibacillus sp. D9, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

43556..45106
DNA (1551bp) protein (517aa)
diguanylate cyclase n=1 Tax=Bacillus coahuilensis RepID=UPI0001850F92
Diguanylate cyclase {ECO:0000313|EMBL:KKC49107.1}; TaxID=665792 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. D9.;"
diguanylate cyclase
SCNpilot_bf_inoc_scaffold_17_curated_40
Mollicutes bacterium HR2, Mollicutes, Tenericutes, Bacteria

Not on your lists

45470..46600
DNA (1131bp) protein (377aa)
Branched-chain amino binding protein LivK2 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LC21_ACEWD
Uncharacterized protein {ECO:0000313|EMBL:KFZ26814.1}; TaxID=1541960 species="Bacteria; Tenericutes; Mollicutes.;" source="Mollicutes bacterium HR2.;"
livK2; branched-chain amino binding protein precursor LivK2; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_bf_inoc_scaffold_17_curated_41
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46816..47694
DNA (879bp) protein (293aa)
Inner-membrane translocator n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GG06_EUBLK
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:ADO38490.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
SCNpilot_bf_inoc_scaffold_17_curated_42
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47696..48715
DNA (1020bp) protein (340aa)
High-affinity branched-chain amino acid ABC transporter system permease protein LivM n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZH5_CLOA9
livM1; high-affinity branched-chain amino acid ABC transporter system permease LivM
High-affinity branched-chain amino acid ABC transporter system permease protein LivM {ECO:0000313|EMBL:AFS78187.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
SCNpilot_bf_inoc_scaffold_17_curated_43
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48693..49451
DNA (759bp) protein (253aa)
ABC transporter related protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GG04_EUBLK
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ADO38488.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
SCNpilot_bf_inoc_scaffold_17_curated_44
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49460..50164
DNA (705bp) protein (235aa)
Branched-chain amino acid transport ATP-binding protein LivF1 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LC17_ACEWD
livF1; branched-chain amino acid transport ATP-binding protein LivF1; K01996 branched-chain amino acid transport system ATP-binding protein
Branched-chain amino acid transport ATP-binding protein LivF1 {ECO:0000313|EMBL:AFA48965.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
SCNpilot_bf_inoc_scaffold_17_curated_45
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50305..51981
DNA (1677bp) protein (559aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SQW7_CLOC7
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ADL50255.1}; Flags: Precursor;; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
SCNpilot_bf_inoc_scaffold_17_curated_46
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52021..53709)
DNA (1689bp) protein (563aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PR19_CLOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH20234.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
SCNpilot_bf_inoc_scaffold_17_curated_47
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53886..54671
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LKB1_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA50031.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
SCNpilot_bf_inoc_scaffold_17_curated_48
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

54840..55076
DNA (237bp) protein (79aa)
Putative uncharacterized protein id=2565521 bin=GWF2_Tenericutes_35_184 species=unknown genus=Carnobacterium taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
hypothetical protein
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
SCNpilot_bf_inoc_scaffold_17_curated_49
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55069..56397
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A969_DESDJ
Uncharacterized protein {ECO:0000313|EMBL:GAE89782.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_17_curated_50
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56532..57077
DNA (546bp) protein (182aa)
Uncharacterized domain HDIG n=1 Tax=Coprococcus sp. CAG:131 RepID=R6M4D6_9FIRM
Uncharacterized domain HDIG {ECO:0000313|EMBL:CDB80972.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
uncharacterized domain HDIG
SCNpilot_bf_inoc_scaffold_17_curated_51
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

57227..57862
DNA (636bp) protein (212aa)
DSBA oxidoreductase n=1 Tax=Clostridium beijerinckii RepID=UPI000316A5CA
DSBA oxidoreductase
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_bf_inoc_scaffold_17_curated_52
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58043..59776
DNA (1734bp) protein (578aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B6FF7B
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:KAJ50325.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
methyl-accepting chemotaxis sensory transducer
SCNpilot_bf_inoc_scaffold_17_curated_53
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59785..60762
DNA (978bp) protein (326aa)
NADH:flavin oxidoreductase n=1 Tax=Clostridium sp. BNL1100 RepID=H2JJ83_9CLOT
NADH oxidase {ECO:0000313|EMBL:KGK84246.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
NADH:flavin oxidoreductase
SCNpilot_bf_inoc_scaffold_17_curated_54
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60855..61724)
DNA (870bp) protein (290aa)
AraC family transcriptional regulator n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C6W7_9CLOT
AraC family transcriptional regulator {ECO:0000313|EMBL:EOR25062.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
AraC family transcriptional regulator; K13653 AraC family transcriptional regulator
SCNpilot_bf_inoc_scaffold_17_curated_55
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62123..63790
DNA (1668bp) protein (556aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Turicibacter sp. HGF1 RepID=F0HIW6_9FIRM
family 5 extracellular solute-binding protein; K15580 oligopeptide transport system substrate-binding protein
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_bf_inoc_scaffold_17_curated_56
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63862..64821
DNA (960bp) protein (320aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HCJ9_ILYPC
binding-protein-dependent transport system inner membrane protein; K15581 oligopeptide transport system permease protein
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_bf_inoc_scaffold_17_curated_57
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

64821..65831
DNA (1011bp) protein (337aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HCK0_ILYPC
binding-protein-dependent transport system inner membrane protein; K15582 oligopeptide transport system permease protein
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_bf_inoc_scaffold_17_curated_58
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65842..66918
DNA (1077bp) protein (359aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HCK1_ILYPC
oligopeptide/dipeptide ABC transporter ATPase; K15583 oligopeptide transport system ATP-binding protein
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_bf_inoc_scaffold_17_curated_59
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

66908..67834
DNA (927bp) protein (309aa)
ABC transporter, ATP-binding protein n=2 Tax=Turicibacter RepID=D4W994_9FIRM
ABC transporter; K10823 oligopeptide transport system ATP-binding protein
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_bf_inoc_scaffold_17_curated_60
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

67926..68729
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Bacillus sp. ZYK RepID=UPI000301BFFA
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEG29130.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
sDR; short-chain dehydrogenase/reductase SDR
Displaying items 31-60 of 742 in total

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