ggKbase home page

SCNpilot_bf_inoc_scaffold_1252_curated_10

Organism: scnpilot_dereplicated_Clostridiales_1

near complete RP 49 / 55 MC: 5 BSCG 51 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 7623..11147

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 999.99
  • Bit_score: 1780
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 999.99
  • Bit_score: 1760
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CS66_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 999.99
  • Bit_score: 1780
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caldisalinibacter kiritimatiensis → Caldisalinibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3525
TTGATCGAATTCAACAATTTTGATTCTATAAGAATTGGATTAGCATCACCAGATAAAATTAGATCGTGGTCAAAAGGTGAAGTTAAAAAACCAGAAACGATCAACTATAGAACTTTAAAACCTGAAAAAGAAGGTCTTTTCTGTGAAAAGATCTTCGGACCTACAAAAGACTGGGAATGTCATTGTGGGAAGTATAAAAAAGTAAGATATAAAGGGGTTGTTTGTGACCGTTGTGGCGTTGAAGTCACTAAGTCAAAAGTACGTCGTGAACGTATGGGACATATAGAACTCGCGGCACCTGTATCTCACATCTGGTATTTCAAAGGGATTCCATCTAAGATGGGTATTCTTCTTGACTTATCACCTAGATCACTTGAGAAGGTTTTATATTTTGCTTCTTATATAGTGATTGAAGCTGGCGAAACGAGCTTAGAGTATAAGCAGCTTCTAACTGAGAGCGAGTATGCTCAGTATAGAGAAAAATATGGTAACACATTTAGAGCGATGATGGGTGCAGAAGCGGTAAAAGAAATTTTACAACAAGTCGACTTAGAAGGCCTTGCTGAAGAACTTAAAACGCAGCTTAAAGACAGTTCTGGTCAAAGAAAAATAAGAATTGTTAGAAGACTTGAAGTTGTTGAAGCATTTAGACAATCTGGCAATGATCCTGAATGGATGATATTAGATGTCGTTCCAGTAATTCCGCCAGATTTAAGACCAATGGTTCAATTAGATGGTGGTCGTTTTGCTACAGCAGATTTAAATGACCTTTATAGAAGAGTTATTAATAGAAACAATCGTCTAAAAAGACTTTTAGAGCTTGGTGCGCCAGATATTATCGTTAGAAATGAAAAGCGTATGCTTCAAGAAGCAGTTGATGCATTAATTGATAATGGTAGAAGAGGTCGTCCGGTTACTGGTCCTGGTAACAGACCACTTAAATCACTGTCTGATTTATTAAAAGGTAAACAAGGTCGCTTTAGACAAAACTTACTTGGTAAACGCGTTGACTACTCTGGTCGTTCGGTTATCGTAGTAGGACCTGAACTTAAATTCTACCAATGTGGTCTTCCTAAGAAGATGGCATTGGAATTATTTAAACCTTTCGTTATGAAGCGTCTGGTAAATGATGGTTATGTCCATAATATTAAAAGTGCAAAACGTATGGTTGAAAGAGTGAAGCCAGAAGTTTGGAGCATTGTAGAAGAGGTAATTGCAGAGCATCCAGTTCTGCTAAACCGTGCGCCAACACTTCATAGACTTGGGATTCAAGCTTTTGAACCAGTGTTAGTTGAAGGTAAAGCGATTAGACTACATCCACTTGTATGTACTGCATACAATGCCGATTTTGACGGTGACCAGATGGCAGTCCACGTACCACTTTCAGTTGAAGCACAAGCGGAAGCAAGATTTTTAATGCTCTCAGTAAATAATATTTTGGCACCTAAAGATGGTAGACCAATTACTACACCTACACAGGATATGGTACTTGGCGCATATTATTTGACCTACCAAAATGAAGAACAGCCTACTGAAAAACGTGTTTTTAAAGATATGGATGAATTGAATCTTGCATATTATAATGAAGCAATTAGCCTTCATGAAAGAGTTAAAATGCGAAGATATCTTCCAGAGGAAGATAGAACCATCCTGGTTGAAAGTACAGTTGGTAGATTTATCTTCAATGAAAAAATTCCTCAAAACCTTGGTTTTGTTGATAGAACAGAAAATCCATACACTTTAGAGATCGACTTCTTATGTAAGAAAAAAGATCTCGAAGAAATCATTGCAAAATGTTTCGTTGAGTATGGGAACACAATTACAGCAGAACTTCTTGATCATATGAAAAACATTGGTTTCAGATATTCTACAAGAGCTGCAATCACTGTTGCGGTTTCAGACATGGATATTCCTGAGGCTAAAAAAGACCTTATTGCAGGTGCGAGAAACACGGTAGACCAATACCAAAAAGCATTTAGACGCGGTCTTATTTCAGAAGAAGAAAGATATGAAAAAGTCATCCAAACTTGGACTAAAACAACAGAAGAAGTTACAGATGCACTTATGAAAAATCTTTCTAACTTAAACAACATCAAAATCATGGCGGACTCAGGTGCCCGTGGTTCTAAAAATCAGATTAGACAGTTAGCAGGTATGCGTGGTCTGATGGCCAATGCACTTGGTAAAACAGTTGAGATTCCAATCGTTTCAAACTTCCGTGAAGGTCTATCTGTCCTCGAGTACTTTATTTCGACGACAGGTGCTCGTAAAGGTCTTGCCGATACAGCACTTCGTACAGCCGATTCAGGGTACTTAACAAGAAGACTTGTTGACGTTAGCCAGGAAGTAATCGTTCGTGAAATTGACTGTCAAACTACCTCTGGGATTGAAGTTGTTGAATTTAGAGAAGGCAATGAATTAATTGAGCCTTTAGCAGAGCGTATTTTAGGTAGATATCCAGTTGAAGACATATTACATCCAACAACCGGCGAAGTATTATGTACAATCAACCAAATTATCTCAGAAAAAATTGCTGATAAAATCATTGCAGCTGGTTTCAAAACGTTAAGAATCAGATCGGTTCTTACCTGTGATACACAATATGGTGTTTGCTCTAAGTGTTATGGACTTAACCTTGCAACTGGAAAACCTGTTCATGTCGGCGAGGCGGTAGGTATTATCGCAGCTCAGTCAATCGGTGAACCTGGTACTCAGCTTACAATGAGAACGTTCCATACAGGCGGTGTTGCCGGCGGCGATATCACACAAGGTCTTCCTCGTGTTGAGGAACTTTTTGAAGCAAGAAAGCCAAAAGGTCTTGCAGTAATTGCTGAAATCGATGGCGTAGTTTCATTTAAAGAAACAAAGAAGAAAAAAGAAGTCGTAATCACTAATGAAGAGAGTGGTGAACAACATACTTCATTAATCGTATTCGGGGCAAGACTTAAGGTTAAAGAGGGCGATCGCGTTATTAAAGGACAATCAATAACAGAAGGTTCGATTAATCCACACGATCTGCTTAGAGTGGTTGGCGTATATGGTGTTAGAGAGTACATCATCAAAGAAGTTCAAAAAGTTTATAGACTTCAAGGTGTTGATATCAATGACAAGCATATCGAAATCATCGTTAAGCAAATGCTTTCTAAGATTAAAATTGACGAATCCGGAGATTCATTATTACTTCCAGGAACTGTCGTTAGTTTAAAAGAATTCAACCGTATTAATGAAGCACTTCAAGCTGAAGGCGGTGAATCTGCTGAAGGAACAAGAACCCTTCTAGGTATTACGAAGGCATCTTTAGCGACAGAATCGTTCTTATCAGCTGCTTCTTTCCAAGAGACGACTCGTGTCTTAACGGAAGCTGCTATTAATGGTAAAGAGGATAGACTCCTCGGTCTTAAAGAAAACGTTATCATTGGAAAGCTAATCCCAGCCGGTACTGGTATGCGCTACTACAAAGAAATGTCAGTAAAATCAGACGATGATTTTGATCTTGGAGACGTTGAAACCTTTAATAGTATTTAA
PROTEIN sequence
Length: 1175
LIEFNNFDSIRIGLASPDKIRSWSKGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWECHCGKYKKVRYKGVVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSKMGILLDLSPRSLEKVLYFASYIVIEAGETSLEYKQLLTESEYAQYREKYGNTFRAMMGAEAVKEILQQVDLEGLAEELKTQLKDSSGQRKIRIVRRLEVVEAFRQSGNDPEWMILDVVPVIPPDLRPMVQLDGGRFATADLNDLYRRVINRNNRLKRLLELGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKFYQCGLPKKMALELFKPFVMKRLVNDGYVHNIKSAKRMVERVKPEVWSIVEEVIAEHPVLLNRAPTLHRLGIQAFEPVLVEGKAIRLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLSVNNILAPKDGRPITTPTQDMVLGAYYLTYQNEEQPTEKRVFKDMDELNLAYYNEAISLHERVKMRRYLPEEDRTILVESTVGRFIFNEKIPQNLGFVDRTENPYTLEIDFLCKKKDLEEIIAKCFVEYGNTITAELLDHMKNIGFRYSTRAAITVAVSDMDIPEAKKDLIAGARNTVDQYQKAFRRGLISEEERYEKVIQTWTKTTEEVTDALMKNLSNLNNIKIMADSGARGSKNQIRQLAGMRGLMANALGKTVEIPIVSNFREGLSVLEYFISTTGARKGLADTALRTADSGYLTRRLVDVSQEVIVREIDCQTTSGIEVVEFREGNELIEPLAERILGRYPVEDILHPTTGEVLCTINQIISEKIADKIIAAGFKTLRIRSVLTCDTQYGVCSKCYGLNLATGKPVHVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGGDITQGLPRVEELFEARKPKGLAVIAEIDGVVSFKETKKKKEVVITNEESGEQHTSLIVFGARLKVKEGDRVIKGQSITEGSINPHDLLRVVGVYGVREYIIKEVQKVYRLQGVDINDKHIEIIVKQMLSKIKIDESGDSLLLPGTVVSLKEFNRINEALQAEGGESAEGTRTLLGITKASLATESFLSAASFQETTRVLTEAAINGKEDRLLGLKENVIIGKLIPAGTGMRYYKEMSVKSDDDFDLGDVETFNSI*