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SCNpilot_bf_inoc_scaffold_67_curated_130

Organism: scnpilot_dereplicated_Clostridiales_1

near complete RP 49 / 55 MC: 5 BSCG 51 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: comp(129662..130099)

Top 3 Functional Annotations

Value Algorithm Source
Positive regulator of sigma E, RseC/MucC n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TQP8_ALKMQ similarity UNIREF
DB: UNIREF100
  • Identity: 34.8
  • Coverage: 141.0
  • Bit_score: 101
  • Evalue 7.70e-19
Sigma E positive regulator RseC/MucC {ECO:0000313|EMBL:KJF28061.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.7
  • Coverage: 147.0
  • Bit_score: 102
  • Evalue 3.70e-19
sigma E positive regulator RseC/MucC; K03803 sigma-E factor negative regulatory protein RseC similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 141.0
  • Bit_score: 101
  • Evalue 2.40e-19

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Taxonomy

Clostridium aceticum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 438
ATGGATAGAGCTGGTATCGTAATCAATCAAATGGGTGAATACTCAAGGGTGAAACTCGTCAGACATACGGCGTGCGGCAATTGCGGTGCTTGTCAGTTAGGCGATGATCAAAAGGACATCATGCTAATTGCCAAAAATGCGGTAAGTGCAAAGGAAGGCGACTTGGTAGAAGTGTCTATGGAGACTGGTGGTGTCCTTAGTGCGGCATTTATTATGTATGTGATACCGCTATTTGGTCTATTTGTAGGGTTGTTTGTTGGGCAAGGTCTCTTTAAGACAAACGAAATCATGACCGCTGTCTTTGGCGTAATCGTCATGGCCTTGACTTATTTGGTGATTAAACTCAATGACAAGCGATTTTTAAAGAACGATAAATATACTGCTAAAATTTTAAAGGTTTTACAATCTGAACATGAAGGCTTGGTACCATTAAGCTAA
PROTEIN sequence
Length: 146
MDRAGIVINQMGEYSRVKLVRHTACGNCGACQLGDDQKDIMLIAKNAVSAKEGDLVEVSMETGGVLSAAFIMYVIPLFGLFVGLFVGQGLFKTNEIMTAVFGVIVMALTYLVIKLNDKRFLKNDKYTAKILKVLQSEHEGLVPLS*