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SCNpilot_bf_inoc_scaffold_67_curated

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Displaying items 1-30 of 178 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_67_curated_1
Listeria riparia, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(994..1515)
DNA (522bp) protein (174aa)
Acetyltransferase n=2 Tax=Listeria seeligeri RepID=E3ZLW0_LISSE
GNAT family acetyltransferase {ECO:0000313|EMBL:EUJ44477.1}; TaxID=1265816 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria riparia FSL S10-1204.;"
acetyltransferase, GNAT family
SCNpilot_bf_inoc_scaffold_67_curated_2
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1557..2081)
DNA (525bp) protein (175aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2E9I0_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERI91062.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
N-acetyltransferase GCN5
SCNpilot_bf_inoc_scaffold_67_curated_3
Exiguobacterium sp. MH3, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2165..2620)
DNA (456bp) protein (152aa)
DNA mismatch repair protein MutT n=1 Tax=Exiguobacterium sp. MH3 RepID=U6B8D0_9BACL
DNA mismatch repair protein MutT {ECO:0000313|EMBL:AHA29575.1}; TaxID=1399115 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacterium sp. MH3.;"
ntp pyrophosphohydrolase
SCNpilot_bf_inoc_scaffold_67_curated_4
Viridibacillus arenosi, Viridibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2879..3271)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Bacillus alcalophilus ATCC 27647 RepID=J8TS37_BACAO
Uncharacterized protein {ECO:0000313|EMBL:ETT85226.1}; TaxID=1227360 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Viridibacillus.;" source="Viridibacillus arenosi FSL R5-213.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_67_curated_5
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(3494..3967)
DNA (474bp) protein (158aa)
GCN5-related N-acetyltransferase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F7G5_9BACT
GCN5-related N-acetyltransferase
Tax=ACD4
SCNpilot_bf_inoc_scaffold_67_curated_6

Not on your lists

comp(3990..5117)
DNA (1128bp) protein (376aa)
Phage integrase family protein n=1 Tax=uncultured organism RepID=M1QA82_9ZZZZ
Phage integrase family protein {ECO:0000313|EMBL:AGF92873.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
phage integrase family protein
SCNpilot_bf_inoc_scaffold_67_curated_7
Bacillus sp. 2_A_57_CT2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5700..6245)
DNA (546bp) protein (182aa)
Endoribonuclease L-PSP n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WLQ4_9BACI
Endoribonuclease L-PSP {ECO:0000313|EMBL:EFV76458.1}; TaxID=665959 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 2_A_57_CT2.;"
endoribonuclease L-PSP
SCNpilot_bf_inoc_scaffold_67_curated_8
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6276..7007)
DNA (732bp) protein (244aa)
Uncharacterized protein {ECO:0000313|EMBL:KGO10267.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
SCNpilot_bf_inoc_scaffold_67_curated_9
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(7091..8008)
DNA (918bp) protein (306aa)
SAM-dependent methyltransferase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EFI8_CLOPA
methyltransferase type 11
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
SCNpilot_bf_inoc_scaffold_67_curated_10
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8005..8502)
DNA (498bp) protein (166aa)
MarR family transcriptional regulator n=1 Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6IXN1_9BACL
MarR family transcriptional regulator {ECO:0000313|EMBL:EST11431.1}; TaxID=1395513 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; Sporolactobacillus.;" source="Sporolactobacillus laevolacticus DSM 442.;"
transcriptional regulator
SCNpilot_bf_inoc_scaffold_67_curated_11
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8490..9044)
DNA (555bp) protein (185aa)
Acetyltransferase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G122_CLOPA
Acetyltransferase {ECO:0000313|EMBL:ETD69801.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
putative acetyltransferase
SCNpilot_bf_inoc_scaffold_67_curated_12
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9153..10112)
DNA (960bp) protein (320aa)
Putative permease n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DD03_9FIRM
Putative permease {ECO:0000313|EMBL:ERI94665.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
permease; K07089
SCNpilot_bf_inoc_scaffold_67_curated_13
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10225..10761)
DNA (537bp) protein (179aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2ENX4_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ERI94666.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
MarR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_67_curated_14
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10959..11606)
DNA (648bp) protein (216aa)
HAD family hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
Phosphoglycolate phosphatase, bacterial n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2ADX7_9FIRM
Phosphoglycolate phosphatase, bacterial {ECO:0000313|EMBL:EMZ24668.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
SCNpilot_bf_inoc_scaffold_67_curated_15
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11667..12641)
DNA (975bp) protein (325aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIR3_ALKOO
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEZ86842.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_bf_inoc_scaffold_67_curated_16
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12657..13673)
DNA (1017bp) protein (339aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIR4_ALKOO
Uncharacterized protein {ECO:0000313|EMBL:KEZ86843.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
binding-protein-dependent transport system inner membrane protein
SCNpilot_bf_inoc_scaffold_67_curated_17
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13670..14752)
DNA (1083bp) protein (361aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIR2_ALKOO
Uncharacterized protein {ECO:0000313|EMBL:KEZ86844.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
oligopeptide/dipeptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_bf_inoc_scaffold_67_curated_18
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14749..17229)
DNA (2481bp) protein (827aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIR5_ALKOO
Uncharacterized protein {ECO:0000313|EMBL:KEZ86845.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein
SCNpilot_bf_inoc_scaffold_67_curated_19
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17502..17759
DNA (258bp) protein (86aa)
Glutaredoxin 3 n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJH2_ALKOO
glutaredoxin 3; K03676 glutaredoxin 3
Glutaredoxin 3 {ECO:0000313|EMBL:ABW19954.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
SCNpilot_bf_inoc_scaffold_67_curated_20
unknown

Not on your lists

comp(17821..17967)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_67_curated_21
Alcanivorax sp. 19-m-6, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18104..18754)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S3L4_PROA2
Uncharacterized protein {ECO:0000313|EMBL:KGD64607.1}; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. 19-m-6.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_67_curated_22
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18751..19761)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. AKL17 RepID=UPI00038076E4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC71643.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
SCNpilot_bf_inoc_scaffold_67_curated_23
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19904..20581)
DNA (678bp) protein (226aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1).;"
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KBT1_HALHC
pyruvate formate-lyase 1-activating enzyme
SCNpilot_bf_inoc_scaffold_67_curated_24
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(20568..22796)
DNA (2229bp) protein (743aa)
Formate acetyltransferase {ECO:0000313|EMBL:ADO83942.1}; EC=2.3.1.54 {ECO:0000313|EMBL:ADO83942.1};; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain DSM 2926 / CuHBu1).;"
formate acetyltransferase (EC:2.3.1.54); K00656 formate C-acetyltransferase [EC:2.3.1.54]
Formate acetyltransferase n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HCG6_ILYPC
SCNpilot_bf_inoc_scaffold_67_curated_25
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23103..25067)
DNA (1965bp) protein (655aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] rbh
Transketolase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAC3_9FIRM
SCNpilot_bf_inoc_scaffold_67_curated_26
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25342..25563)
DNA (222bp) protein (74aa)
RNA-binding protein Hfq n=1 Tax=Clostridium ultunense Esp RepID=M1Z5R5_9CLOT
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
RNA-binding protein Hfq
SCNpilot_bf_inoc_scaffold_67_curated_27
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25608..26522)
DNA (915bp) protein (305aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostrept
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75]
tRNA dimethylallyltransferase n=1 Tax=Peptostreptococcus anaerobius VPI 4330 RepID=L1MD94_9FIRM
SCNpilot_bf_inoc_scaffold_67_curated_28
unknown

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comp(26689..27600)
DNA (912bp) protein (304aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_67_curated_29
unknown

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comp(27624..28910)
DNA (1287bp) protein (429aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_67_curated_30
unknown

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comp(28930..30306)
DNA (1377bp) protein (459aa)

This feature has no annotations

Displaying items 1-30 of 178 in total

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