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SCNpilot_bf_inoc_scaffold_67_curated

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Displaying items 31-60 of 178 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_67_curated_31
unknown

Not on your lists

comp(30357..30899)
DNA (543bp) protein (181aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_67_curated_32
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31020..33401)
DNA (2382bp) protein (794aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium sp. CAG:470 RepID=R7FML4_9CLOT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
DNA mismatch repair protein MutL
SCNpilot_bf_inoc_scaffold_67_curated_33
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33446..36133)
DNA (2688bp) protein (896aa)
DNA mismatch repair protein MutS n=1 Tax=Caloramator australicus RC3 RepID=I7KSP1_9CLOT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00039014}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS
SCNpilot_bf_inoc_scaffold_67_curated_34
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36135..37580)
DNA (1446bp) protein (482aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NA
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=2 Tax=Clostridium difficile RepID=T4PM51_CLODI
radical SAM protein; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
SCNpilot_bf_inoc_scaffold_67_curated_35
unknown

Not on your lists

comp(37766..38035)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_67_curated_36
GWE2_Clostridiales_32_10_curated, Clostridiales, Bacteria

Not on your lists

comp(38091..39797)
DNA (1707bp) protein (569aa)
Putative uncharacterized protein id=2104590 bin=GWE2_Clostridiales_32_10 species=Clostridium kluyveri genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
Tax=GWE2_Clostridiales_32_10_curated
SCNpilot_bf_inoc_scaffold_67_curated_37
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39931..41328)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2XYU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL01908.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
KWG repeat-containing protein
SCNpilot_bf_inoc_scaffold_67_curated_38
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(41570..42466)
DNA (897bp) protein (299aa)
Response regulator receiver protein n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3H958_ILYPC
response regulator receiver protein; K07719 two-component system, response regulator YcbB
Response regulator receiver protein {ECO:0000313|EMBL:ADO82757.1}; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain DSM 2926 / CuHBu1).;"
SCNpilot_bf_inoc_scaffold_67_curated_39
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42498..43778)
DNA (1281bp) protein (427aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
integral membrane sensor signal transduction histidine kinase; K07717 two-component system, sensor histidine kinase YcbA [EC:2.7.13.3]
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3H957_ILYPC
SCNpilot_bf_inoc_scaffold_67_curated_40
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

comp(43995..44816)
DNA (822bp) protein (274aa)
Tax=RBG_13_Chloroflexi_56_8b_curated
SCNpilot_bf_inoc_scaffold_67_curated_41
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45157..46347)
DNA (1191bp) protein (397aa)
class I and II aminotransferase; K00812 aspartate aminotransferase [EC:2.6.1.1]
Aspartate aminotransferase n=1 Tax=Clostridium sp. BL8 RepID=T0NDL2_9CLOT
Aspartate aminotransferase {ECO:0000313|EMBL:EQB88195.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
SCNpilot_bf_inoc_scaffold_67_curated_42
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(46484..47077)
DNA (594bp) protein (198aa)
Phosphoglycerate mutase n=2 Tax=Bacillus RepID=U5L4S7_9BACI
Phosphoglycerate mutase {ECO:0000313|EMBL:CQR55057.1}; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus riograndensis SBR5.;"
phosphoglycerate mutase
SCNpilot_bf_inoc_scaffold_67_curated_43
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47173..47727)
DNA (555bp) protein (185aa)
Nitroreductase n=4 Tax=Thermoanaerobacter RepID=B0K1K6_THEPX
Nitroreductase {ECO:0000313|EMBL:AIS51809.1}; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter kivui (Acetogenium kivui).;"
nitroreductase
SCNpilot_bf_inoc_scaffold_67_curated_44
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(47744..48166)
DNA (423bp) protein (141aa)
Transcriptional regulator, MarR family n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9GGH7_9BACL
MarR family transcriptional regulator {ECO:0000313|EMBL:KEQ23634.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
MarR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_67_curated_45
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48355..49560)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BH56_9FIRM
ABC-2 type transporter; K09696 sodium transport system permease protein
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_bf_inoc_scaffold_67_curated_46
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49553..50332)
DNA (780bp) protein (260aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FUV6_9CLOT
ABC transporter; K09697 sodium transport system ATP-binding protein
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_bf_inoc_scaffold_67_curated_47
Geobacillus sp. WCH70, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(50612..52138)
DNA (1527bp) protein (509aa)
alkyl hydroperoxide reductase subunit F; K03387 alkyl hydroperoxide reductase subunit F [EC:1.6.4.-]
Alkyl hydroperoxide reductase, F subunit n=1 Tax=Geobacillus sp. (strain WCH70) RepID=C5D5D6_GEOSW
Alkyl hydroperoxide reductase, F subunit {ECO:0000313|EMBL:ACS23362.1}; TaxID=471223 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. (strain WCH70).;"
SCNpilot_bf_inoc_scaffold_67_curated_48
Bacillus hemicellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(52150..52713)
DNA (564bp) protein (188aa)
alkyl hydroperoxide reductase subunit C (EC:1.11.1.15)
alkyl hydroperoxide reductase subunit C n=1 Tax=Paenibacillus daejeonensis RepID=UPI00038145C6
Alkyl hydroperoxide reductase protein C {ECO:0000313|EMBL:GAE32588.1}; TaxID=1236971 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus hemicellulosilyticus JCM 9152.;"
SCNpilot_bf_inoc_scaffold_67_curated_49
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52958..54043)
DNA (1086bp) protein (362aa)
HD-GYP domain-containing protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VP44_CLOSH
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AGC68449.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
SCNpilot_bf_inoc_scaffold_67_curated_50
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54208..55674)
DNA (1467bp) protein (489aa)
Putative ATPase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LTY2_CLOCD
putative ATPase; K06915
Putative ATPase {ECO:0000313|EMBL:AEV67328.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
SCNpilot_bf_inoc_scaffold_67_curated_51
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55754..56968)
DNA (1215bp) protein (405aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3H9L2_ILYPC
major facilitator superfamily protein
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_bf_inoc_scaffold_67_curated_52
Bacillus sp. 2_A_57_CT2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(57431..58189)
DNA (759bp) protein (253aa)
MerR family transcriptional regulator n=1 Tax=Bacillus coahuilensis RepID=UPI00018513A8
TipAS antibiotic-recognition domain-containing protein {ECO:0000313|EMBL:EFV75474.1}; TaxID=665959 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 2_A_57_CT2.;"
MerR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_67_curated_53
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


58366..60168
DNA (1803bp) protein (601aa)
Oligoendopeptidase F id=1267181 bin=GWE1_Spirochaete_60_18 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
Putative oligoendopeptidase F {ECO:0000313|EMBL:CEG25830.1}; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
rplF; 50S ribosomal protein L6
SCNpilot_bf_inoc_scaffold_67_curated_54
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60272..61042)
DNA (771bp) protein (257aa)
cheR2; chemotaxis protein methyltransferase CheR (EC:2.1.1.80)
Chemotaxis protein methyltransferase CheR {ECO:0000313|EMBL:AFS78447.1}; EC=2.1.1.80 {ECO:0000313|EMBL:AFS78447.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
Chemotaxis protein methyltransferase CheR n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B083_CLOA9
SCNpilot_bf_inoc_scaffold_67_curated_55
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61147..62253)
DNA (1107bp) protein (369aa)
RNA binding S1 domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRF8_ALKMQ
RNA-binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1
RNA binding S1 domain protein {ECO:0000313|EMBL:ABR48776.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
SCNpilot_bf_inoc_scaffold_67_curated_56
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62253..63113)
DNA (861bp) protein (287aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABZ7_9FIRM
SCNpilot_bf_inoc_scaffold_67_curated_57
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63224..63838)
DNA (615bp) protein (205aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRG0_ALKMQ
SCNpilot_bf_inoc_scaffold_67_curated_58
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63857..64507)
DNA (651bp) protein (217aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
cmk; cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14]
Cytidylate kinase n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CNJ0_CLOSO
SCNpilot_bf_inoc_scaffold_67_curated_59
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(64634..65485)
DNA (852bp) protein (284aa)
Transcriptional regulator n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IJD7_THETR
N-acetylmannosamine kinase {ECO:0000313|EMBL:KJF28846.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
RpiR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_67_curated_60
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(65520..66059)
DNA (540bp) protein (180aa)
korC; 2-oxoglutarate synthase subunit KorC (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit {ECO:0000313|EMBL:ADL07960.1}; EC=1.2.7.3 {ECO:0000313|EMBL:ADL07960.1};; Flags: Precursor;; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
2-oxoglutarate synthase subunit KorC n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LUB9_TEPAE
Displaying items 31-60 of 178 in total

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