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SCNpilot_bf_inoc_scaffold_205_curated

Search features with annotation key words

Displaying items 1-30 of 256 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_205_curated_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..95
DNA (93bp) protein (31aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B8F4A
P pilus assembly protein, pilin FimA
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_bf_inoc_scaffold_205_curated_2
unknown

Not on your lists

comp(181..1260)
DNA (1080bp) protein (360aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_205_curated_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1300..4032)
DNA (2733bp) protein (911aa)
P pilus assembly protein, porin PapC (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VK97_9GAMM
P pilus assembly protein, porin PapC {ECO:0000313|EMBL:EIL87638.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
P pilus assembly protein, porin PapC
SCNpilot_bf_inoc_scaffold_205_curated_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4047..4784)
DNA (738bp) protein (246aa)
P pilus assembly protein, chaperone PapD n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL01_9GAMM
P pilus assembly protein, chaperone PapD {ECO:0000313|EMBL:EIL87892.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
P pilus assembly protein, chaperone PapD; K15540 chaperone protein EcpD
SCNpilot_bf_inoc_scaffold_205_curated_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4856..5440)
DNA (585bp) protein (195aa)
Major type 1 subunit fimbrin (Pilin) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL02_9GAMM
Major type 1 subunit fimbrin (Pilin) {ECO:0000313|EMBL:EIL87893.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
fimbrial protein
SCNpilot_bf_inoc_scaffold_205_curated_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6019..6630
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL04_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87895.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_205_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6627..7094
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2X7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93818.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_bf_inoc_scaffold_205_curated_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7091..7285
DNA (195bp) protein (65aa)
XRE family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ64_9GAMM
putative transcriptional regulator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_bf_inoc_scaffold_205_curated_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7302..8888
DNA (1587bp) protein (529aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Rhodanobacter denitrificans RepID=M4NDH8_9GAMM
putative hydrolase or acyltransferase of alpha/beta superfamily
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_bf_inoc_scaffold_205_curated_10
unknown

Not on your lists

8885..9058
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_205_curated_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9055..9789
DNA (735bp) protein (245aa)
Sodium ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2X4_9GAMM
ABC-type Na+ transport system, ATPase component
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_bf_inoc_scaffold_205_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9786..10991
DNA (1206bp) protein (402aa)
Na+ efflux pump ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2X3_9GAMM
Na+ efflux pump ABC transporter permease {ECO:0000313|EMBL:EIL93814.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type Na+ efflux pump, permease component
SCNpilot_bf_inoc_scaffold_205_curated_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11013..11864)
DNA (852bp) protein (284aa)
Hydrolase of the alpha-beta fold superfamily protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL11_9GAMM
Hydrolase of the alpha-beta fold superfamily protein {ECO:0000313|EMBL:EIL87902.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
SCNpilot_bf_inoc_scaffold_205_curated_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11967..13061)
DNA (1095bp) protein (365aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ21_9GAMM
SCNpilot_bf_inoc_scaffold_205_curated_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13088..13777
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ20_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89311.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_205_curated_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13847..14104
DNA (258bp) protein (86aa)
Sec-independent protein translocase protein TatA n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL14_9GAMM
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
twin arginine-targeting protein translocase, TatA/E family
SCNpilot_bf_inoc_scaffold_205_curated_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14135..14554
DNA (420bp) protein (140aa)
Sec-independent protein translocase protein TatB n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL15_9GAMM
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
twin arginine-targeting protein translocase TatB
SCNpilot_bf_inoc_scaffold_205_curated_18
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14541..15302
DNA (762bp) protein (254aa)
Sec-independent protein translocase protein TatC n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL16_9GAMM
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
twin arginine targeting protein translocase subunit TatC
SCNpilot_bf_inoc_scaffold_205_curated_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15367..17583)
DNA (2217bp) protein (739aa)
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily n=1 Tax=Rhodanobacter denitrificans RepID=M4ND94_9GAMM
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily {ECO:0000313|EMBL:AGG87413.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
phosphoglycerol transferase family protein, alkaline phosphatase superfamily
SCNpilot_bf_inoc_scaffold_205_curated_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17663..18892)
DNA (1230bp) protein (410aa)
Multifunctional CCA protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W341_9GAMM
Multifunctional CCA protein {ECO:0000256|HAMAP-Rule:MF_01261, ECO:0000256|SAAS:SAAS00054545}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tRNA nucleotidyltransferase/poly(A) polymerase
SCNpilot_bf_inoc_scaffold_205_curated_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18970..21096)
DNA (2127bp) protein (709aa)
Soluble lytic murein transglycosylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUZ6_9GAMM
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:EIM03288.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
soluble lytic murein transglycosylase-like protein
SCNpilot_bf_inoc_scaffold_205_curated_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21227..22843
DNA (1617bp) protein (539aa)
Exo-beta-1,3-glucanase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDA7_9GAMM
exo-beta-1,3-glucanase
Exo-beta-1,3-glucanase {ECO:0000313|EMBL:AGG87428.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_205_curated_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22857..23540
DNA (684bp) protein (228aa)
Short chain dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Z9_9GAMM
Short chain dehydrogenase {ECO:0000313|EMBL:EIL95240.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_bf_inoc_scaffold_205_curated_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23524..23916)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAE5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87429.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_205_curated_25
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23913..24707)
DNA (795bp) protein (265aa)
endonuclease n=1 Tax=Dyella japonica RepID=UPI00030FF6A7
Endonuclease {ECO:0000313|EMBL:AIF46710.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
metal-dependent hydrolase
SCNpilot_bf_inoc_scaffold_205_curated_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24776..25444)
DNA (669bp) protein (223aa)
Thiol:disulfide interchange protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WVE4_9GAMM
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
protein-disulfide isomerase
SCNpilot_bf_inoc_scaffold_205_curated_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25492..26373)
DNA (882bp) protein (294aa)
Protein-disulfide isomerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCD8_9GAMM
protein-disulfide isomerase
Protein-disulfide isomerase {ECO:0000313|EMBL:AGG87432.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_205_curated_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26436..27230)
DNA (795bp) protein (265aa)
Cytochrome c553 n=1 Tax=Rhodanobacter denitrificans RepID=M4NDB2_9GAMM
cytochrome c553
Cytochrome c553 {ECO:0000313|EMBL:AGG87433.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_205_curated_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27337..27969
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003496A79
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cell division checkpoint GTPase YihA
SCNpilot_bf_inoc_scaffold_205_curated_30
unknown

Not on your lists

28111..28581
DNA (471bp) protein (157aa)

This feature has no annotations

Displaying items 1-30 of 256 in total

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