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SCNpilot_bf_inoc_scaffold_85_curated

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Displaying items 91-120 of 218 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_85_curated_91

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100704..101105
DNA (402bp) protein (134aa)
GtrA family protein n=1 Tax=uncultured bacterium RepID=K2DX61_9BACT
GtrA family protein {ECO:0000313|EMBL:EKE01577.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
GtrA family protein
SCNpilot_bf_inoc_scaffold_85_curated_92
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101087..101698
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Xylella fastidiosa 6c RepID=V8KEZ6_XYLFS
Uncharacterized protein {ECO:0000313|EMBL:AIC12766.1}; TaxID=1401256 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa MUL0034.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_85_curated_93
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101857..103176
DNA (1320bp) protein (440aa)
nucleotide sugar dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22]
UDP-glucose 6-dehydrogenase n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000366A338
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:KGM40982.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
SCNpilot_bf_inoc_scaffold_85_curated_94
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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103239..105371
DNA (2133bp) protein (711aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3B7M4_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:GAD62858.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes NBRC 14159.;"
hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_85_curated_95
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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105531..106235
DNA (705bp) protein (235aa)
FkbM family methyltransferase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LR59_9FIRM
FkbM family methyltransferase {ECO:0000313|EMBL:EOS58212.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
methyltransferase FkbM family
SCNpilot_bf_inoc_scaffold_85_curated_96
Acetobacter pasteurianus, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(106300..106998)
DNA (699bp) protein (233aa)
Uncharacterized protein n=8 Tax=Acetobacter pasteurianus subsp. pasteurianus RepID=C7JCA1_ACEP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH99929.1}; TaxID=634452 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153).;"
SCNpilot_bf_inoc_scaffold_85_curated_97
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(107242..109587)
DNA (2346bp) protein (782aa)
Putative uncharacterized protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0Q0_ESCHE
Putative uncharacterized protein {ECO:0000313|EMBL:GAB51558.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
glycosyltransferase
SCNpilot_bf_inoc_scaffold_85_curated_98
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

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comp(109794..110861)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0002F19EAD
Uncharacterized protein {ECO:0000313|EMBL:KIJ80632.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
group 1 glycosyl transferase
SCNpilot_bf_inoc_scaffold_85_curated_99
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(110975..112702)
DNA (1728bp) protein (576aa)
Methyltransferase type 11 (Fragment) n=1 Tax=mine drainage metagenome RepID=T0Z4H6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KFN41927.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_85_curated_100
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(112699..114138)
DNA (1440bp) protein (480aa)
glycosyltransferase, putative, partial n=1 Tax=Burkholderia thailandensis RepID=UPI00016AFB20
Uncharacterized protein {ECO:0000313|EMBL:KFN41926.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
glycosyl transferases group 1 family protein
SCNpilot_bf_inoc_scaffold_85_curated_101
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(114164..115423)
DNA (1260bp) protein (420aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Xanthomonas vasicola RepID=UPI00034B85AB
Uncharacterized protein {ECO:0000313|EMBL:KFN41925.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
ABC transporter ATP-binding protein; K09691 lipopolysaccharide transport system ATP-binding protein
SCNpilot_bf_inoc_scaffold_85_curated_102
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(115420..116211)
DNA (792bp) protein (264aa)
ABC transporter permease n=1 Tax=Xanthomonas sacchari RepID=UPI000262A784
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
wzm; ABC transporter permease; K09690 lipopolysaccharide transport system permease protein
SCNpilot_bf_inoc_scaffold_85_curated_103
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(116238..117323)
DNA (1086bp) protein (362aa)
Cystathionine gamma-synthase (CGS) n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CBZ5_XANCA
cystathionine gamma-synthase (CGS)
Cystathionine gamma-synthase (CGS) {ECO:0000313|EMBL:AEL05668.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;"
SCNpilot_bf_inoc_scaffold_85_curated_104
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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117654..118712
DNA (1059bp) protein (353aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=I4WSP4_9GAMM
SCNpilot_bf_inoc_scaffold_85_curated_105
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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118709..119593
DNA (885bp) protein (295aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VX65_9GAMM
SCNpilot_bf_inoc_scaffold_85_curated_106
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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119590..120147
DNA (558bp) protein (186aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F8_9GAMM
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EIL93299.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_bf_inoc_scaffold_85_curated_107
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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120144..121073
DNA (930bp) protein (310aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJK8_9GAMM
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EIL87399.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_bf_inoc_scaffold_85_curated_108
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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121087..122499
DNA (1413bp) protein (471aa)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJK7_9GAMM
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EIL87398.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
SCNpilot_bf_inoc_scaffold_85_curated_109
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

123133..124620
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002DB7D56
Uncharacterized protein {ECO:0000313|EMBL:KIJ80628.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
SCNpilot_bf_inoc_scaffold_85_curated_110
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(124755..125525)
DNA (771bp) protein (257aa)
SurF1 family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJK6_9GAMM
SurF1 family protein {ECO:0000313|EMBL:EIL87397.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SurF1 family protein; K14998 surfeit locus 1 family protein
SCNpilot_bf_inoc_scaffold_85_curated_111
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(125583..126911)
DNA (1329bp) protein (443aa)
General substrate transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJK5_9GAMM
General substrate transporter {ECO:0000313|EMBL:EIL87396.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
general substrate transporter
SCNpilot_bf_inoc_scaffold_85_curated_112
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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127150..128151
DNA (1002bp) protein (334aa)
cytochrome o ubiquinol oxidase chain II protein (EC:1.10.3.-); K02297 cytochrome o ubiquinol oxidase subunit II [EC:1.10.3.-]
Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJK4_9GAMM
Cytochrome o ubiquinol oxidase subunit II {ECO:0000313|EMBL:EIL87395.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_bf_inoc_scaffold_85_curated_113
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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128173..130200
DNA (2028bp) protein (676aa)
cyoB; cytochrome o ubiquinol oxidase subunit I; K02298 cytochrome o ubiquinol oxidase subunit I [EC:1.10.3.-]
cytochrome O ubiquinol oxidase n=1 Tax=Arhodomonas aquaeolei RepID=UPI000367272F
Cytochrome o ubiquinol oxidase subunit I 2 {ECO:0000313|EMBL:EIT67974.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
SCNpilot_bf_inoc_scaffold_85_curated_114
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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130197..130823
DNA (627bp) protein (209aa)
cyoC; cytochrome o ubiquinol oxidase subunit III protein (EC:1.10.3.-); K02299 cytochrome o ubiquinol oxidase subunit III [EC:1.10.3.-]
Cytochrome ubiquinol oxidase subunit III n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJK1_9GAMM
Cytochrome ubiquinol oxidase subunit III {ECO:0000313|EMBL:EIL87392.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_bf_inoc_scaffold_85_curated_115
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130820..131215
DNA (396bp) protein (132aa)
Cytochrome O ubiquinol oxidase subunit IV (EC:1.10.3.-)
Cytochrome o ubiquinol oxidase subunit IV n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJK0_9GAMM
Cytochrome o ubiquinol oxidase subunit IV {ECO:0000313|EMBL:EIL87391.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_bf_inoc_scaffold_85_curated_116
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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131379..132695
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W587_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94628.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_85_curated_117
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132803..133600)
DNA (798bp) protein (266aa)
Lipolytic protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4Z5_9GAMM
Lipolytic protein {ECO:0000313|EMBL:EIL94536.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lipolytic protein
SCNpilot_bf_inoc_scaffold_85_curated_118
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(133778..134278)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003691D06
ATPase {ECO:0000313|EMBL:KGI77891.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hsp90; Activator of Hsp90 ATPase 1 family protein
SCNpilot_bf_inoc_scaffold_85_curated_119

Not on your lists

comp(134256..134618)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CE1D1
ArsR family transcriptional regulator {ECO:0000313|EMBL:EQD77726.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative transcriptional regulator
SCNpilot_bf_inoc_scaffold_85_curated_120
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134912..136741)
DNA (1830bp) protein (610aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJJ9_9GAMM
glucosamine--fructose-6-phosphate aminotransferase, isomerizing
Displaying items 91-120 of 218 in total

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