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SCNpilot_bf_inoc_scaffold_85_curated

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Displaying items 121-150 of 218 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_85_curated_121
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(136841..138211)
DNA (1371bp) protein (457aa)
cysteine synthase (EC:4.2.1.22)
Cysteine synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJJ8_9GAMM
Cysteine synthase {ECO:0000313|EMBL:EIL87389.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_bf_inoc_scaffold_85_curated_122
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138377..138604)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSQ4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87733.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_85_curated_123
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139034..139639)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSQ5_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_bf_inoc_scaffold_85_curated_124
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139636..140301)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1E5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93286.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_85_curated_125
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140386..141510
DNA (1125bp) protein (375aa)
Twitching motility protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1E4_9GAMM
Twitching motility protein {ECO:0000313|EMBL:EIL93285.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
pilus retraction protein PilT
SCNpilot_bf_inoc_scaffold_85_curated_126
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141532..141891)
DNA (360bp) protein (120aa)
PH adaptation potassium efflux system G transmembrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTJ5_9GAMM
PH adaptation potassium efflux system G transmembrane protein {ECO:0000313|EMBL:EIL90536.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
multisubunit potassium/proton antiporter, PhaG subunit
SCNpilot_bf_inoc_scaffold_85_curated_127
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141888..142169)
DNA (282bp) protein (94aa)
Putative monovalent cation/H+ antiporter subunit F n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTJ4_9GAMM
Putative monovalent cation/H+ antiporter subunit F {ECO:0000313|EMBL:EIL90535.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
multisubunit Na+/H+ antiporter, MnhF subunit
SCNpilot_bf_inoc_scaffold_85_curated_128
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142166..142651)
DNA (486bp) protein (162aa)
Putative monovalent cation/H+ antiporter subunit E n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTJ3_9GAMM
Putative monovalent cation/H+ antiporter subunit E {ECO:0000313|EMBL:EIL90534.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
multisubunit Na+/H+ antiporter, MnhE subunit
SCNpilot_bf_inoc_scaffold_85_curated_129
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142648..144192)
DNA (1545bp) protein (515aa)
Putative monovalent cation/H+ antiporter subunit D n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTJ2_9GAMM
Putative monovalent cation/H+ antiporter subunit D {ECO:0000313|EMBL:EIL90533.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
SCNpilot_bf_inoc_scaffold_85_curated_130
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144189..144527)
DNA (339bp) protein (113aa)
Putative monovalent cation/H+ antiporter subunit C n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTJ1_9GAMM
Putative monovalent cation/H+ antiporter subunit C {ECO:0000313|EMBL:EIL90532.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
multisubunit Na+/H+ antiporter, MnhC subunit
SCNpilot_bf_inoc_scaffold_85_curated_131
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144527..147406)
DNA (2880bp) protein (960aa)
Putative monovalent cation/H+ antiporter subunit A n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTJ0_9GAMM
Putative monovalent cation/H+ antiporter subunit A {ECO:0000313|EMBL:EIL90531.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
phaA; multicomponent K+:H+ antiporter subunit A; K05559 multicomponent K+:H+ antiporter subunit A
SCNpilot_bf_inoc_scaffold_85_curated_132
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147601..148461
DNA (861bp) protein (287aa)
Universal stress protein UspA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTI9_9GAMM
Universal stress protein UspA {ECO:0000313|EMBL:EIL90530.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
universal stress protein UspA
SCNpilot_bf_inoc_scaffold_85_curated_133
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148487..149143)
DNA (657bp) protein (219aa)
maleylacetoacetate isomerase (EC:5.2.1.2)
Maleylacetoacetate isomerase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWW2_9GAMM
Maleylacetoacetate isomerase {ECO:0000313|EMBL:EIL91703.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_bf_inoc_scaffold_85_curated_134
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149261..150442
DNA (1182bp) protein (394aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
3-phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWW1_9GAMM
SCNpilot_bf_inoc_scaffold_85_curated_135
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150442..151074
DNA (633bp) protein (211aa)
haloacid dehalogenase n=1 Tax=Dyella japonica RepID=UPI0002DEB458
HAD family hydrolase {ECO:0000313|EMBL:AIF49400.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
putative phosphatase
SCNpilot_bf_inoc_scaffold_85_curated_136
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151141..153141)
DNA (2001bp) protein (667aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
transketolase (EC:2.2.1.1)
Transketolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWF9_9GAMM
SCNpilot_bf_inoc_scaffold_85_curated_137
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153378..154112
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003481FB4
Autotransporter {ECO:0000313|EMBL:AHX11991.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
OmpA-like transmembrane domain protein
SCNpilot_bf_inoc_scaffold_85_curated_138
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154348..154941
DNA (594bp) protein (198aa)
autotransporter n=1 Tax=Dyella ginsengisoli RepID=UPI00034550B2
Uncharacterized protein {ECO:0000313|EMBL:EIL93279.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
opacity protein
SCNpilot_bf_inoc_scaffold_85_curated_139
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155024..156028)
DNA (1005bp) protein (335aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGD4_9GAMM
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:EIL98525.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_bf_inoc_scaffold_85_curated_140
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156161..156601)
DNA (441bp) protein (147aa)
TonB family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGD3_9GAMM
Gram-negative bacterial tonB protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_bf_inoc_scaffold_85_curated_141
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156684..158156)
DNA (1473bp) protein (491aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Pyruvate kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGD2_9GAMM
pyruvate kinase
SCNpilot_bf_inoc_scaffold_85_curated_142
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158280..159101)
DNA (822bp) protein (274aa)
S1/P1 Nuclease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGD1_9GAMM
S1/P1 Nuclease {ECO:0000313|EMBL:EIL98522.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
S1/P1 Nuclease
SCNpilot_bf_inoc_scaffold_85_curated_143
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159192..159656)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D44ED1
Peroxiredoxin {ECO:0000313|EMBL:AIF49409.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
OsmC family protein
SCNpilot_bf_inoc_scaffold_85_curated_144
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159653..162889)
DNA (3237bp) protein (1079aa)
Acriflavin resistance protein (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VV84_9GAMM
Acriflavin resistance protein {ECO:0000313|EMBL:EIL91125.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cation/multidrug efflux pump
SCNpilot_bf_inoc_scaffold_85_curated_145
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162886..163977)
DNA (1092bp) protein (364aa)
RND family efflux transporter MFP subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI51_9GAMM
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EIL86892.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
RND family efflux transporter, MFP subunit
SCNpilot_bf_inoc_scaffold_85_curated_146
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164001..164213)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY57_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92148.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_85_curated_147
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164260..165534)
DNA (1275bp) protein (425aa)
NADH dehydrogenase, FAD-containing subunit (EC:1.8.5.-)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI49_9GAMM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KGI78473.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
SCNpilot_bf_inoc_scaffold_85_curated_148
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165709..166080
DNA (372bp) protein (124aa)
ArsR family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEU0_9GAMM
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGI78472.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative transcriptional regulator
SCNpilot_bf_inoc_scaffold_85_curated_149
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166172..166612
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00038233FB
NODE_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97767.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
serine/threonine protein phosphatase
SCNpilot_bf_inoc_scaffold_85_curated_150
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166713..167714
DNA (1002bp) protein (334aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1D3_9GAMM
gapA; Glyceraldehyde-3-phosphate dehydrogenase
Displaying items 121-150 of 218 in total

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