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SCNpilot_bf_inoc_scaffold_85_curated

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Displaying items 151-180 of 218 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_85_curated_151
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(167935..168258)
DNA (324bp) protein (108aa)
Ferredoxin n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VX91_9GAMM
Ferredoxin {ECO:0000313|EMBL:EIL91832.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ferredoxin
SCNpilot_bf_inoc_scaffold_85_curated_152
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168439..169902
DNA (1464bp) protein (488aa)
Cytochrome-cbb3 oxidase, subunit I n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDM4_9GAMM
Cytochrome-cbb3 oxidase, subunit I {ECO:0000313|EMBL:EIL97565.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cytochrome c oxidase, cbb3-type, subunit I
SCNpilot_bf_inoc_scaffold_85_curated_153
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170017..170673
DNA (657bp) protein (219aa)
Cbb3-type cytochrome c oxidase subunit II n=1 Tax=Rhodanobacter denitrificans RepID=I4WX97_9GAMM
cytochrome c oxidase, cbb3-type, subunit II
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_bf_inoc_scaffold_85_curated_154
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170670..170852
DNA (183bp) protein (61aa)
Cytochrome c oxidase subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDM2_9GAMM
Cbb3-type cytochrome oxidase component FixQ
Cytochrome c oxidase subunit {ECO:0000313|EMBL:EIL97563.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_bf_inoc_scaffold_85_curated_155
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170849..171760
DNA (912bp) protein (304aa)
Cbb3-type cytochrome c oxidase subunit n=2 Tax=Rhodanobacter sp. 115 RepID=I4WWE2_9GAMM
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cytochrome c oxidase, cbb3-type, subunit III
SCNpilot_bf_inoc_scaffold_85_curated_156
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171741..171968
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NEM7_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_bf_inoc_scaffold_85_curated_157
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171965..174193
DNA (2229bp) protein (743aa)
Heavy metal translocating P-type ATPase n=1 Tax=Rhodanobacter denitrificans RepID=M4NNN6_9GAMM
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AGG89301.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_85_curated_158
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174190..174378
DNA (189bp) protein (63aa)
Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WK13_9GAMM
cytochrome oxidase maturation protein, cbb3-type
Cytochrome oxidase maturation protein, cbb3-type {ECO:0000313|EMBL:EIL99804.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_bf_inoc_scaffold_85_curated_159
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174375..174785
DNA (411bp) protein (137aa)
Hemoglobin-like protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWD8_9GAMM
Hemoglobin-like protein {ECO:0000313|EMBL:EIM03780.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
truncated hemoglobin
SCNpilot_bf_inoc_scaffold_85_curated_160
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(174831..175514)
DNA (684bp) protein (228aa)
MIP family protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3A9F6
Major intrinsic protein {ECO:0000313|EMBL:KGQ17877.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
major intrinsic protein
SCNpilot_bf_inoc_scaffold_85_curated_161
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175511..175897)
DNA (387bp) protein (129aa)
protein tyrosine phosphatase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B54317
Protein tyrosine phosphatase {ECO:0000313|EMBL:KGQ17876.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
protein-tyrosine phosphatase
SCNpilot_bf_inoc_scaffold_85_curated_162
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176013..176258)
DNA (246bp) protein (82aa)
ArsR family transcriptional regulator n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B36CC5
ArsR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_bf_inoc_scaffold_85_curated_163
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176417..176917)
DNA (501bp) protein (167aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
peroxiredoxin (EC:1.11.1.5)
Probable thiol peroxidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGC5_9GAMM
SCNpilot_bf_inoc_scaffold_85_curated_164
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176944..177396)
DNA (453bp) protein (151aa)
Integral membrane protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIE7_9GAMM
Integral membrane protein {ECO:0000313|EMBL:EIL86988.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_85_curated_165
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177407..178675)
DNA (1269bp) protein (423aa)
NnrS family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIE6_9GAMM
NnrS family protein {ECO:0000313|EMBL:EIL86987.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
uncharacterized protein involved in response to NO
SCNpilot_bf_inoc_scaffold_85_curated_166
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178729..179490)
DNA (762bp) protein (254aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4W2C9_9GAMM
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EIL93620.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cAMP-binding protein
SCNpilot_bf_inoc_scaffold_85_curated_167
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179589..180365)
DNA (777bp) protein (259aa)
Flavodoxin reductase family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WFG5_9GAMM
flavodoxin reductase family protein
Flavodoxin reductase family protein {ECO:0000313|EMBL:AGG87652.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_85_curated_168
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

180917..181903
DNA (987bp) protein (329aa)
Sigma 54-dependent transcriptional activator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH62_9GAMM
Sigma 54-dependent transcriptional activator {ECO:0000313|EMBL:EIL98803.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
SCNpilot_bf_inoc_scaffold_85_curated_169
unknown

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comp(181768..182046)
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_85_curated_170
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

182085..182357
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAU7_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_bf_inoc_scaffold_85_curated_171
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

182393..184003
DNA (1611bp) protein (537aa)
Putative phage tail sheath protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WFG8_9GAMM
Putative phage tail sheath protein {ECO:0000313|EMBL:EIL98805.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
phage tail sheath protein FI
SCNpilot_bf_inoc_scaffold_85_curated_172
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184020..184547
DNA (528bp) protein (176aa)
Conserved hypothetical phage tail region protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WFG9_9GAMM
conserved hypothetical phage tail region protein
Conserved hypothetical phage tail region protein {ECO:0000313|EMBL:AGG87656.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_85_curated_173
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184553..185290
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH66_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98807.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_85_curated_174
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

186024..187268
DNA (1245bp) protein (415aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NAV0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87659.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_85_curated_175
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

187265..189418
DNA (2154bp) protein (718aa)
AAA+ family ATPase n=1 Tax=Rhodanobacter denitrificans RepID=M4NAR5_9GAMM
AAA+ family ATPase {ECO:0000313|EMBL:AGG87660.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
AAA+ family ATPase
SCNpilot_bf_inoc_scaffold_85_curated_176
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189415..189720
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIM2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87661.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_85_curated_177
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189713..191389
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZUI0_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:GAD64732.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes NBRC 14159.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_85_curated_178
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

191463..192194
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMJ8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87666.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_85_curated_179
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

192191..192847
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMJ6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87668.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_85_curated_180
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

192917..193525
DNA (609bp) protein (203aa)
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin n=2 Tax=Alicycliphilus denitrificans RepID=E8TZJ6_ALIDB
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin {ECO:0000313|EMBL:AEB83150.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying items 151-180 of 218 in total

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