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SCNpilot_bf_inoc_scaffold_1339_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1339_curated_1
unknown

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comp(216..533)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1339_curated_2
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(937..1731)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F670E
Uncharacterized protein {ECO:0000313|EMBL:AIF48161.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_bf_inoc_scaffold_1339_curated_3
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1970..2200
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003693D81
DNA-binding protein {ECO:0000313|EMBL:AIF48160.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1339_curated_4
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2206..2748)
DNA (543bp) protein (181aa)
Putative arsenate reductase arsC-like protein {ECO:0000313|EMBL:CCD99731.1}; EC=1.20.4.1 {ECO:0000313|EMBL:CCD99731.1};; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
arsenate reductase subunit ArsC-like protein (EC:1.20.4.1); K03741 arsenate reductase [EC:1.20.4.1]
Putative arsenate reductase arsC-like protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SZV4_9BRAD
SCNpilot_bf_inoc_scaffold_1339_curated_5
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2888..4120)
DNA (1233bp) protein (411aa)
Major facilitator transporter n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EDN3_9BURK
Major facilitator transporter {ECO:0000313|EMBL:EKZ97450.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
major facilitator superfamily protein
SCNpilot_bf_inoc_scaffold_1339_curated_6
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4176..4877)
DNA (702bp) protein (234aa)
Cytochrome c biogenesis protein, transmembrane region n=2 Tax=Oligotropha carboxidovorans RepID=B6JKB7_OLICO
cytochrome c biogenesis protein, transmembrane region; K06196 cytochrome c-type biogenesis protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
SCNpilot_bf_inoc_scaffold_1339_curated_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4880..5140)
DNA (261bp) protein (87aa)
Thioredoxin/glutaredoxin n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ3_NITHX
thioredoxin/glutaredoxin
Thioredoxin/glutaredoxin {ECO:0000313|EMBL:ABE65004.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_bf_inoc_scaffold_1339_curated_8
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5152..5559)
DNA (408bp) protein (136aa)
Putative MerR family regulatory protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMA3_THIA3
putative MerR family regulatory protein
Putative MerR family regulatory protein {ECO:0000313|EMBL:CAZ89681.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCNpilot_bf_inoc_scaffold_1339_curated_9
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5612..5881)
DNA (270bp) protein (90aa)
Putative Thioredoxin/glutaredoxin n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMA4_THIA3
putative Thioredoxin/glutaredoxin
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCNpilot_bf_inoc_scaffold_1339_curated_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6194..6547)
DNA (354bp) protein (118aa)
Transcription regulator protein, arsenical resistance operon repressor n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSY4_9GAMM
Transcription regulator protein, arsenical resistance operon repressor {ECO:0000313|EMBL:EIL90325.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative transcriptional regulator
SCNpilot_bf_inoc_scaffold_1339_curated_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6640..7713)
DNA (1074bp) protein (358aa)
Arsenical-resistance protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLL0_9GAMM
arsenical-resistance protein
Arsenical-resistance protein {ECO:0000313|EMBL:AGG88558.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_1339_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7710..8228)
DNA (519bp) protein (173aa)
Protein-tyrosine-phosphatase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFN0_9GAMM
protein-tyrosine-phosphatase
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:AGG88862.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_1339_curated_13
Chromohalobacter salexigens, Chromohalobacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8255..8572)
DNA (318bp) protein (106aa)
Transcriptional regulator, ArsR family n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1QXG9_CHRSD
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABE58839.1}; TaxID=290398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Chromohalobacter.;" source="Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB; 13768).;"
SCNpilot_bf_inoc_scaffold_1339_curated_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8625..9440
DNA (816bp) protein (272aa)
Arsenical resistance protein ArsH n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP05_9GAMM
Arsenical resistance protein ArsH {ECO:0000313|EMBL:EIM01197.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
arsenical resistance protein ArsH
SCNpilot_bf_inoc_scaffold_1339_curated_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9437..9916
DNA (480bp) protein (160aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glutaredoxin-dependent arsenate reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDQ0_9GAMM
glutaredoxin-dependent arsenate reductase
SCNpilot_bf_inoc_scaffold_1339_curated_16
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10039..10785)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00036ABE93
transposase-related ATP-binding subunit
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
SCNpilot_bf_inoc_scaffold_1339_curated_17
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(10775..12166)
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-602-C20 RepID=UPI00037517A9
Uncharacterized protein {ECO:0000313|EMBL:KIJ72197.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
Integrase catalytic region protein
SCNpilot_bf_inoc_scaffold_1339_curated_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12550..12861)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa RepID=B3G2L1_PSEAI
Putative uncharacterized protein {ECO:0000313|EMBL:ACD39273.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1339_curated_19
unknown

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13015..13884
DNA (870bp) protein (290aa)

This feature has no annotations

Displaying 19 items

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