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SCNpilot_bf_inoc_scaffold_2428_curated_10

Organism: scnpilot_dereplicated_Rhodanobacter_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 8341..8907

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 188.0
  • Bit_score: 372
  • Evalue 3.30e-100
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 188.0
  • Bit_score: 363
  • Evalue 3.40e-98
DNA-directed RNA polymerase subunit beta n=1 Tax=Dyella japonica RepID=UPI0003162D7E similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 188.0
  • Bit_score: 372
  • Evalue 2.30e-100

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Taxonomy

Dyella japonica → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGCAGCACGTGGACCTCAAGTCGCTGACCGACGACGAGATCCTCGCGCTCGCGAACAACCTGCAACAGGGCGTGCCGATGGCCACGCCGGTGTTCGACGGCGCCGAGGAAACCGAGATCAAGGCGATGCTGAAGCTGGCGGATCTGCCCGAGTCGGGCCAGACCACGCTGTTCGACGGCCGCACCGGCGAGGCGTTCGATCGCCCGGTCACCGTGGGCTACATGCACTACCTGAAGCTCAACCACCTGGTCGACGACAAGATGCACGCCCGCTCCACCGGCCCGTACTCGCTGGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGCGAAATGGAAGTCTGGGCGCTGGAAGCCTACGGCGCGGCCTACACCCTGCAGGAAATGCTGACGGTGAAGTCCGACGACGTGCAGGGCCGCAACCAGATGTACAAGAACATCGTCGACGGCAACCACGAGATGGCGGCCGGCATGCCGGAATCCTTCAACGTGCTGGTGAAGGAAATCCGCTCGCTGGGCATCGACATCGACCTGGAAGAGATCAAGTGA
PROTEIN sequence
Length: 189
VQHVDLKSLTDDEILALANNLQQGVPMATPVFDGAEETEIKAMLKLADLPESGQTTLFDGRTGEAFDRPVTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGNHEMAAGMPESFNVLVKEIRSLGIDIDLEEIK*