ggKbase home page

SCNpilot_bf_inoc_scaffold_298_curated_3

Organism: scnpilot_dereplicated_Solirubrobacterales_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(6644..10357)

Top 3 Functional Annotations

Value Algorithm Source
Putative internalin n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U331_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 33.3
  • Coverage: 757.0
  • Bit_score: 353
  • Evalue 7.30e-94
Putative internalin {ECO:0000313|EMBL:ERK92369.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.3
  • Coverage: 757.0
  • Bit_score: 353
  • Evalue 1.00e-93
OmpA domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 768.0
  • Bit_score: 328
  • Evalue 7.90e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Myxococcus sp. (contaminant ex DSM 436) → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3714
GTGAAAACCGTCACGCGTCGTTCTGCCCACCTTCGACTGATCGGGGCTGCTCTTTGCCTTGTTCTCGCTTACATCGGGTTTGCCGAGGCGACCGCGAACGCGGCCACGCCCGTGATCGTCAATAGCACGAGGTGGCTCGGATCGGACCGATTCGCGGAGAAGACCGAGGACGACAGTTTCATCGCCATCGTCGTGCGTCACGACGTGGGACGAAAGGTCACCGGCCTGCGCATCGACAGCGACAAGAACGGCACTGACAACACCGCCTCGGTCGGAATCACTGACGTGAGTCCGATCGCCGAACAGAAGAGCTTCCAAGGTGGCTACGAGTACACCAAGGTGATCTACAAGTTCCGTCCGACGTCCGGCGGCAACGGTTTCTCGTGCAACTTGATCGGTTCCAAGACGAGGTCGAACTCGTTCCCGCTGCGGATCCGGGCCCGCCTCGACAACGGCGAGGAGACCGCCTCCTCGACCATCAACGCAACCTGGCAGGCGTCTGGCGACTGCGCATACTCCACCGACTACGCGATCCTCTGGAATCCTCAACAGTCGGCGACCCAAGTCCGCCCGGGCCAGGCGGTCACCTTCCAGGTCACCGGCGACGATCCCGACTCGGTCATCAACGAGCCTGATTTCAGCTCGGTCACCCCGCGCCTCCGCAACATCCTCACCGGCGAGACGATCATGGGTGACCAGATCACCGGCACCGGCCAGGATCGCATCTGCAACACGGCAGGCGACAACAACACCATGGTCTTCCCGATCAGCTTCCCCAAACGGGGAACCTGGATCGTCGAGTCCCAGGCCGGCTCGGGCACTCACCTTCTCAGCCCCACCTGCGGCGCCGCCGGCAACACCGGCTGGTACTCGCTCGGCGTGGTCAGCGTCAACTCGCTCGCCTCGACCAGCCCGACTGCAGACTTCAACGCGACCCGACCGGTCGTGAACGGCACTACCAACATCACCGCCACCAACGTCCTCGATCCCGATGACCAGGCTGCGGGCGGCCGGGTCCAGGACATCGAGTGGGATCTCGACTTCAACGCGGCCAATGGCATCGACGGCTTCGAGCAAGGCGTCCGCGGCGACCCCGATACCGGGTTGCCCGGTGGCAGCACGACCCGCAGCATCAACACCACCGGGTTCACCCCGGGCTGGTACACCGTGCGCACCCGGATCTCGGACAACGGCGCCTCCAACGGTGCGGACAACGCCTCGGCTCGGGTCATCTACTCGACCCAGTTCCTGGTCAACAGCCTGCCCACCGCGGCCGGCCAGGACCGGACGCTGACCTCGACGGACACCCTGCCGCTCACTCTGCAGGGCACCGATACCGACGTCTTCCCGCTGATGGGGGTCGATGACCAGTCGAACCTGCAGTACTCGATCATCGACCCGCCGGACCACGGAACCCTTTCCACGCTTGGCGGCACCTTCGGCAACCAGACCGTCTATGACCCGAGTGGGACGAATTACTCCGGCAACGACTCGTTCACCTACAAGGTCGACGACGGCTACGGCGGCGTCGACGTCGCGACGGTCAATCTCGAGGTGACGCCGCCGACTGACATCGACCTCGCGCCGAACCCGATGGTCGATCACAACGACCGCGGCGCCACCGTCGAGTTCAGCTCGCCGACCGAGGAGGACCCCGGTGCGACCCTCGATCACTTCGAGTGCTCGCTCGACTTCGGCAACTGGCAGACCTGCACGTCGCCGCACAACTTGACTGACCTGAGCGACGGCCTGCATAACTTCCGGGTTCGCGCCCACGGTGGCGACGGCACGGTCGACGCGACCCCGGCTCAGGCCGAGTGGGTCGTCGACGCCAAGCCGAGCGTCGCCTTCACCAGCACGCCCGCCGCCGACAGCGGCGACCCCGATCCGGTCTTCGAGTTCACGACCGACGAGGCCGGCAACACCGTTCCACTCGAGGTGACCTGCGTGCTGGACAACGACATCCGTCGTCCCTGCGAGTCGCCGTACGGGCTGACCGACATCGACGACGGCCCGCACTCGTTGACCGTCTTCGCGGTCGACCAGTACGGCCGCGAGACCTCCAACACCTACGAGTGGGAAGTCTCGCGCGACGGGGTGCTCACCAACCTGGTGGGTACCTACCCGCAGTTCTCCGACAGCGCCGACCAGGACTTCGAGTTCGACTCGAACGACCCGGCCAACACCTTCGAGTGCAGTCTCGACGGTGCGGCTTGGAGCGCCTGCACGACCCCGCAGAGCTTCACCGGCCTCGCCGACGGGCAGCACACCTTCAAGGTTCGGGCGAAGAACCCGGCCAACGTGGTCGACGAGACGCCCGCCTCCTGGTCATGGAAGATCGACACGGTCGCTCCGGACACCACCCTGGACGACTTCAACCGGGCGATCACCAACCAGGCGATAACCGCACGCCCGAAGTCGAACGAGGCCGTGGTCCAGTACGTCTGCTCGATCGACGGCGGCAGCTTCAACCCCTGCTCCAGCCCGCTCACCGGGCCGAGCCTGGCCGACGGCAACCACATGCTCCGGGTTTCCGCGGTCGATCGCGCCGGCAACGTGGACATGACGCCCGCCGAGCAAGGCTGGCAGCTCGACACGGTCGCGCCTACGTCATCGATCACCGCCGGGCCTGCCGAAGGTGCTCACCTGAACGTCTCGACCGCCGATCTGGAATTCGAGTTCGCAGCCGATGATTCTGCGGTCTCGGCCCAGTGCTCGCTCGACGGCGAAAGCTGGCGGGATTGCGAGAGCGCCACAGAGCAGAGCTACGCGGGCCTGCTTGACGGTGACCACACCTTCAAGGTGCGCGGCGTCGATGCGGCCGGCAACGTCGAGGTTCCCGGCTCGCAGCGCAGCTGGACGGTGGACACGGCGGTCCCGACCGTGACGATCGCCTCCGGCCCCGCCGGCGCGGTGACCGACCGGGAAGCGACCTTCAAGTTCGCAAGCTCGGAGGCCGGCCAGGTCGAGTGCAGCCTGGACGGCGGCGCCTGGCAGGAGTGCTCCAGCCCCCAGACCTACACGGGCATGCCGGACGGCGACCATCACCTCAAGATCAGGGCCACCGACATGTTCGGCAACCAGGGTCCGGCTACTGGTCGTAGCTGGAAGGTCAAGTCCGTCATCAACAACCCGCTGACGATTCCTGTCGCGCCGGCCTGCTCCTTCGCCAGCTCACAGTCCGGGTGCCGGATGCCAAACGTGACCGGCAAGTTCCTGACCCGACCGGGCAAGGGCGGTGCCAGCAAGGTCCAGCTCCAGATCGACTCGCCGACCACCGACATGTCGGTGGCCCGGATCCGACTCGGCCGGCGTTCCGCCTACGTGCTGAAGTCGAAGTCGAAGGGCAAGAACGCCTTGACCGTCACCACGACCAACCGCTCCGGCGAGAAGACCACGAGTGTCTTCAAGGCTCGAGGAGCGGGCCGAGAGGGAGTCCGGACGCTGACCTCGACCGACGGGAAGATGACTGCGAGCATCACGCTCGGCAACGAAGCCATCATCGAGGTCGCGAACCTCGACGAAGGCATCGGCCGCGTCACCTTCACGGTGCCGGCCCTCCGCCACGCGCTGAGGGTCCGTCCGGGCAAGAAGGCACCGACCCAGAAGTGGTTTGGCACGGCGCAGGACCGAGAAGGCCACTGGGTCACCACCAACATGTTCATCGACCCGCCACGAGCTAAGAAGGCCGGCGGGAAGGGCGGCCGCAAGTGA
PROTEIN sequence
Length: 1238
VKTVTRRSAHLRLIGAALCLVLAYIGFAEATANAATPVIVNSTRWLGSDRFAEKTEDDSFIAIVVRHDVGRKVTGLRIDSDKNGTDNTASVGITDVSPIAEQKSFQGGYEYTKVIYKFRPTSGGNGFSCNLIGSKTRSNSFPLRIRARLDNGEETASSTINATWQASGDCAYSTDYAILWNPQQSATQVRPGQAVTFQVTGDDPDSVINEPDFSSVTPRLRNILTGETIMGDQITGTGQDRICNTAGDNNTMVFPISFPKRGTWIVESQAGSGTHLLSPTCGAAGNTGWYSLGVVSVNSLASTSPTADFNATRPVVNGTTNITATNVLDPDDQAAGGRVQDIEWDLDFNAANGIDGFEQGVRGDPDTGLPGGSTTRSINTTGFTPGWYTVRTRISDNGASNGADNASARVIYSTQFLVNSLPTAAGQDRTLTSTDTLPLTLQGTDTDVFPLMGVDDQSNLQYSIIDPPDHGTLSTLGGTFGNQTVYDPSGTNYSGNDSFTYKVDDGYGGVDVATVNLEVTPPTDIDLAPNPMVDHNDRGATVEFSSPTEEDPGATLDHFECSLDFGNWQTCTSPHNLTDLSDGLHNFRVRAHGGDGTVDATPAQAEWVVDAKPSVAFTSTPAADSGDPDPVFEFTTDEAGNTVPLEVTCVLDNDIRRPCESPYGLTDIDDGPHSLTVFAVDQYGRETSNTYEWEVSRDGVLTNLVGTYPQFSDSADQDFEFDSNDPANTFECSLDGAAWSACTTPQSFTGLADGQHTFKVRAKNPANVVDETPASWSWKIDTVAPDTTLDDFNRAITNQAITARPKSNEAVVQYVCSIDGGSFNPCSSPLTGPSLADGNHMLRVSAVDRAGNVDMTPAEQGWQLDTVAPTSSITAGPAEGAHLNVSTADLEFEFAADDSAVSAQCSLDGESWRDCESATEQSYAGLLDGDHTFKVRGVDAAGNVEVPGSQRSWTVDTAVPTVTIASGPAGAVTDREATFKFASSEAGQVECSLDGGAWQECSSPQTYTGMPDGDHHLKIRATDMFGNQGPATGRSWKVKSVINNPLTIPVAPACSFASSQSGCRMPNVTGKFLTRPGKGGASKVQLQIDSPTTDMSVARIRLGRRSAYVLKSKSKGKNALTVTTTNRSGEKTTSVFKARGAGREGVRTLTSTDGKMTASITLGNEAIIEVANLDEGIGRVTFTVPALRHALRVRPGKKAPTQKWFGTAQDREGHWVTTNMFIDPPRAKKAGGKGGRK*