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SCNpilot_bf_inoc_scaffold_298_curated

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_298_curated_1
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(2..1867)
DNA (1866bp) protein (622aa)
FHA domain containing protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UTW2_ROSS1
FHA domain-containing protein
FHA domain containing protein {ECO:0000313|EMBL:ABQ90065.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SCNpilot_bf_inoc_scaffold_298_curated_2
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1899..6608)
DNA (4710bp) protein (1570aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002F658E6
hypothetical protein
Conserved repeat domain protein {ECO:0000313|EMBL:ACL02916.1}; Flags: Precursor;; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
SCNpilot_bf_inoc_scaffold_298_curated_3
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6644..10357)
DNA (3714bp) protein (1238aa)
Putative internalin n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U331_9DELT
Putative internalin {ECO:0000313|EMBL:ERK92369.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
OmpA domain-containing protein
SCNpilot_bf_inoc_scaffold_298_curated_4

Not on your lists

comp(10583..12892)
DNA (2310bp) protein (770aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK55014.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_bf_inoc_scaffold_298_curated_5
unknown

Not on your lists

comp(13096..13650)
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_298_curated_6
unknown

Not on your lists

comp(13885..14337)
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_298_curated_7
unknown

Not on your lists

comp(14816..15214)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_298_curated_8
unknown

Not on your lists

comp(15198..17135)
DNA (1938bp) protein (646aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_298_curated_9
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17559..18806
DNA (1248bp) protein (416aa)
Cytosine-specific methyltransferase n=1 Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V2E6_9PSEU
Site-specific DNA methylase {ECO:0000313|EMBL:EID54299.1}; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;"
DNA-cytosine methyltransferase
SCNpilot_bf_inoc_scaffold_298_curated_10
unknown

Not on your lists

comp(19470..19706)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_298_curated_11
unknown

Not on your lists

comp(19808..20242)
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_298_curated_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(20253..21830)
DNA (1578bp) protein (526aa)
Integrase family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F465_CONWI
integrase
Integrase family protein {ECO:0000313|EMBL:ADB50437.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_298_curated_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(22052..22369)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F210_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB50185.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_298_curated_14
Mycobacterium phage PattyP, Caudovirales, Viruses

Not on your lists

comp(22366..23346)
DNA (981bp) protein (327aa)
DNA methylase n=1 Tax=Mycobacterium phage PattyP RepID=R4JEL7_9CAUD
DNA methylase {ECO:0000313|EMBL:AGK87348.1}; TaxID=1327773 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Mycobacterium phage PattyP.;"
site-specific DNA methyltransferase
SCNpilot_bf_inoc_scaffold_298_curated_15
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23343..24233)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E5Y8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10908.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_298_curated_16
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24230..26848)
DNA (2619bp) protein (873aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI00036CFEEC
ATP-binding protein {ECO:0000313|EMBL:AJK56495.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
atp/GTP-binding protein rbh
SCNpilot_bf_inoc_scaffold_298_curated_17
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27041..28108)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037CA617
Kitasatospora griseola strain MF730-N6 RKJC_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ62686.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
restriction/modification system DNA methylase
SCNpilot_bf_inoc_scaffold_298_curated_18
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(28101..29348)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E452_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN11541.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
SCNpilot_bf_inoc_scaffold_298_curated_19
unknown

Not on your lists

comp(29345..29854)
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_298_curated_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(29851..31467)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZ00_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49874.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_298_curated_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(31464..32006)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYZ9_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49873.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_298_curated_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(32003..33895)
DNA (1893bp) protein (631aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYZ9_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49873.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_298_curated_23
unknown

Not on your lists

comp(33892..34593)
DNA (702bp) protein (234aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_298_curated_24
unknown

Not on your lists

comp(34590..34886)
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_298_curated_25
Geomicrobium sp. JCM 19038, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

35994..37178
DNA (1185bp) protein (395aa)
RNA polymerase sigma factor n=1 Tax=Geobacillus sp. WSUCF1 RepID=S7SVX2_9BACI
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1460635 species="Bacteria; Firmicutes; Bacilli; Bacillales; Geomicrobium.;" source="Geomicrobium sp. JCM 19038.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_bf_inoc_scaffold_298_curated_26
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

37325..38866
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYZ4_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49868.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_298_curated_27
unknown

Not on your lists

38900..39334
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_298_curated_28
unknown

Not on your lists

comp(39408..39776)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_298_curated_29
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(39773..41158)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E6B1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10809.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
fenitrothion hydrolase protein FedB
SCNpilot_bf_inoc_scaffold_298_curated_30
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(41164..41616)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBL1_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49380.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying items 1-30 of 85 in total

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