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SCNpilot_bf_inoc_scaffold_298_curated_25

Organism: scnpilot_dereplicated_Solirubrobacterales_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 35994..37178

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Geobacillus sp. WSUCF1 RepID=S7SVX2_9BACI similarity UNIREF
DB: UNIREF100
  • Identity: 23.0
  • Coverage: 183.0
  • Bit_score: 65
  • Evalue 1.30e-07
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1460635 species="Bacteria; Firmicutes; Bacilli; Bacillales; Geomicrobium.;" source="Geomicrobium sp. JCM 19038.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.4
  • Coverage: 140.0
  • Bit_score: 71
  • Evalue 4.20e-09
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 28.6
  • Coverage: 140.0
  • Bit_score: 66
  • Evalue 2.30e-08

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Taxonomy

Geomicrobium sp. JCM 19038 → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1185
ATGTCGATTGGGTTGGTCCATATGAGATGGGCCCTGGACACCGATCAGCTGCGAAGCATCGAGATCGGGTTGCGGTCAAAGCTGCGCGCAAGCCAACTCTCGGAGAGCTTCATCGACAGACACAGCGAAGACCTCCTCCAACAAGCGGTCACTGAGTACGCGAAGACGCGCGAGCGTGGAGTGAACGTCACGAATCCATGCGGATGGATAGTCCACACCGCCCATCGGCGCGCGATAGATCAACTACGTCGTGAACAGCACGAAACCGGCGGGAGCGCCGAGGACATCGCCGCCGACGCGACCGACCAGACAACTCCGCTTCCGGACGAGGAAGCTCTAAGTCACATCGAAGCCGAGGAACTTCACCGGGCGATGTCCCGGCTTTCGGTTCCTCAGCGACAGGCACTCAGCCTCTACTACTTCGAGGACCAAACAACTCGCGACGGCGCCGAAGCACTCGGATGGAGCGAGCCGACCTTCAGACGACGGCGCGACGCGGCGCTCCGAAGTCTGCGCAAGCGCTTCGGGGTTCCTGTGCCCGAGTTCGACATCGGGCTCGCCGCTTGGCTCAGTCTCAGCGCCTCAGAGAGTCGCTTCGGATGGATCACAGGCCACATCGACGGCACGATCGAGACCGCCCGGTCTAGTGCCGTCGCGATCGCGGATCGAACCCGGGAGTTCGCAACGAGGCTCCTATCCTCCGGTGGCGGTGAGACTGCGGTCGGTATTGGCAGCCCGGCCAGCAAAGCAGCCGCCGGAGTTTGCGCGACCGCGATCGCCGCATGCACCGCAACTGGCGTGATCGGGCCAGGCCTCGCCGGAGTTGATCTCATCAACCGTGAAACCAATCCCAAGCCCGTCGTCGAAAAGCGGCTGAAAACCCATAGTCAGCGCCAGGCCCGCCCGGGCCCGGTTTCTCCGGCCCCGACCATCGCCGACAACCGACTGACCGAAGCCGACAGCCAAAAGGCAACCAGGCGGCAGAACTCGACCAGCAAGAGCCGTTCAAAAGAACGGTCTCGACAGGCCAACCAAACCGCGAACTCACAGTTCAGCGTCGAGTCGAGCGCACCTTCCTCTTCGGCCCCGAGTACACCATCCAGCCCACCGGCGAGCACCCCGAGTGCTTCCGCATCCTCGCCAACGCCTGACCAGAGCGCCCAACAGCAATTCGGCCTCCCCTAG
PROTEIN sequence
Length: 395
MSIGLVHMRWALDTDQLRSIEIGLRSKLRASQLSESFIDRHSEDLLQQAVTEYAKTRERGVNVTNPCGWIVHTAHRRAIDQLRREQHETGGSAEDIAADATDQTTPLPDEEALSHIEAEELHRAMSRLSVPQRQALSLYYFEDQTTRDGAEALGWSEPTFRRRRDAALRSLRKRFGVPVPEFDIGLAAWLSLSASESRFGWITGHIDGTIETARSSAVAIADRTREFATRLLSSGGGETAVGIGSPASKAAAGVCATAIAACTATGVIGPGLAGVDLINRETNPKPVVEKRLKTHSQRQARPGPVSPAPTIADNRLTEADSQKATRRQNSTSKSRSKERSRQANQTANSQFSVESSAPSSSAPSTPSSPPASTPSASASSPTPDQSAQQQFGLP*