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SCNpilot_bf_inoc_scaffold_1071_curated

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1071_curated_1
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83..487
DNA (405bp) protein (135aa)
BlaI family transcriptional regulator id=2461036 bin=GWF1_Xanthomonadales_69_6 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:KFN50984.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
CopY family transcriptional repressor; K07737 putative transcriptional regulator
SCNpilot_bf_inoc_scaffold_1071_curated_2
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

484..1446
DNA (963bp) protein (321aa)
Peptidase M48 n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2ZRD8_9PSEU
Membrane protein {ECO:0000313|EMBL:EXU65369.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
peptidase M48, Ste24p
SCNpilot_bf_inoc_scaffold_1071_curated_3
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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1523..2026
DNA (504bp) protein (168aa)
Putative uncharacterized protein id=4176201 bin=GWC2_Chloroflexi_73_18 species=Streptomyces zinciresistens genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
SCNpilot_bf_inoc_scaffold_1071_curated_4
unknown

Not on your lists

2029..2325
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1071_curated_5
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2438..3325
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B4517D
Uncharacterized protein {ECO:0000313|EMBL:AIS00812.1}; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1071_curated_6
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3488..5872
DNA (2385bp) protein (795aa)
cation-transporting ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Putative cation-transporting ATPase n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YMI1_NOCFA
Putative cation-transporting ATPase {ECO:0000313|EMBL:BAD60610.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
SCNpilot_bf_inoc_scaffold_1071_curated_7
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5869..6414)
DNA (546bp) protein (182aa)
membrane protein n=1 Tax=Patulibacter americanus RepID=UPI0003B5E22C
Uncharacterized protein {ECO:0000313|EMBL:EPD94470.1}; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
2SCG38.17c; hypothetical protein
SCNpilot_bf_inoc_scaffold_1071_curated_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

6643..6939
DNA (297bp) protein (99aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA28_CONWI
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADB53123.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1071_curated_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7061..9379)
DNA (2319bp) protein (773aa)
Lead cadmium zinc and mercury transporting ATPase {ECO:0000313|EMBL:EHN10049.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EHN10049.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
ATPase P; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Lead cadmium zinc and mercury transporting ATPase n=1 Tax=Patulibacter medicamentivorans RepID=H0E8F9_9ACTN
SCNpilot_bf_inoc_scaffold_1071_curated_10
Corynebacterium striatum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9376..9624)
DNA (249bp) protein (83aa)
Heavy metal-associated domain protein n=1 Tax=Corynebacterium striatum ATCC 6940 RepID=C2CPL0_CORST
copper-exporting P-type ATPase
Heavy metal-associated domain protein {ECO:0000313|EMBL:EEI78382.1}; TaxID=525268 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium striatum ATCC 6940.;"
SCNpilot_bf_inoc_scaffold_1071_curated_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

9705..10004
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7D1_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB48902.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1071_curated_12
unknown

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comp(10098..10268)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1071_curated_13
unknown

Not on your lists

10855..11154
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1071_curated_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11237..11941
DNA (705bp) protein (235aa)
Lipoprotein n=1 Tax=Patulibacter medicamentivorans RepID=H0E3J1_9ACTN
Lipoprotein {ECO:0000313|EMBL:EHN11742.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1071_curated_15
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12401..14458)
DNA (2058bp) protein (686aa)
Lead cadmium zinc and mercury transporting ATPase {ECO:0000313|EMBL:EHN13023.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EHN13023.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Lead cadmium zinc and mercury transporting ATPase n=1 Tax=Patulibacter medicamentivorans RepID=H0DZR9_9ACTN
ATPase P
SCNpilot_bf_inoc_scaffold_1071_curated_16
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(14455..14814)
DNA (360bp) protein (120aa)
Regulatory protein ArsR n=1 Tax=Patulibacter medicamentivorans RepID=H0DZR8_9ACTN
Regulatory protein ArsR {ECO:0000313|EMBL:EHN13022.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
putative ArsR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_1071_curated_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14973..16157
DNA (1185bp) protein (395aa)
Divalent metal cation transporter MntH n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5N7_CONWI
NRAMP family Mn2+/Fe2+ transporter; K03322 manganese transport protein
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1071_curated_18
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16133..16609)
DNA (477bp) protein (159aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Heavy metal translocating P-type ATPase n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CPC5_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:KDE97043.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 = JCM 16368.;"
SCNpilot_bf_inoc_scaffold_1071_curated_19
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16710..17024)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0AW50_ARTS2
hypothetical protein; K09981 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK05620.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
SCNpilot_bf_inoc_scaffold_1071_curated_20
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(17426..17995)
DNA (570bp) protein (190aa)
Putative conserved integral membrane protein n=2 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8K1M5_STREN
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
SCNpilot_bf_inoc_scaffold_1071_curated_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18207..18818)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2P8_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB54179.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1071_curated_22
Dermacoccus sp. Ellin185, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18821..19693)
DNA (873bp) protein (291aa)
Cation diffusion facilitator family transporter n=1 Tax=Dermacoccus sp. Ellin185 RepID=E3BAA9_9MICO
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EFP58044.1}; TaxID=188626 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus sp. Ellin185.;"
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family
SCNpilot_bf_inoc_scaffold_1071_curated_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

19825..21000
DNA (1176bp) protein (392aa)
Peptidase M23 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F239_CONWI
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ADB50214.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1071_curated_24
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

21187..22029
DNA (843bp) protein (281aa)
Peptidase M23B n=1 Tax=Patulibacter medicamentivorans RepID=H0E3B0_9ACTN
Peptidase M23B {ECO:0000313|EMBL:EHN11834.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
peptidase M23
SCNpilot_bf_inoc_scaffold_1071_curated_25
Dermacoccus sp. Ellin185, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22062..22289)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Dermacoccus sp. Ellin185 RepID=E3BAB1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EFP58029.1}; TaxID=188626 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus sp. Ellin185.;"
hypothetical protein; K09981 hypothetical protein
SCNpilot_bf_inoc_scaffold_1071_curated_26
unknown

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comp(22309..22611)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1071_curated_27
unknown

Not on your lists

comp(22679..23263)
DNA (585bp) protein (195aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1071_curated_28
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23260..24711)
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B35E62
Uncharacterized protein {ECO:0000313|EMBL:EHN11641.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
SCNpilot_bf_inoc_scaffold_1071_curated_29
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24735..25697)
DNA (963bp) protein (321aa)
Putative cation efflux system protein n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q826X7_STRAW
cation efflux system protein; K03295 cation efflux system protein, CDF family rbh
Putative cation efflux system protein {ECO:0000313|EMBL:BAC74759.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
SCNpilot_bf_inoc_scaffold_1071_curated_30
Thermosynechococcus elongatus, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25762..26088
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI000380FB0B
transcriptional repressor SmtB-like protein
Tlr1018 protein {ECO:0000313|EMBL:BAC08571.1}; TaxID=197221 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Thermosynechococcus.;" source="Thermosynechococcus elongatus (strain BP-1).;"
Displaying items 1-30 of 32 in total

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