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SCNpilot_bf_inoc_scaffold_954_curated

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_954_curated_1
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..80
DNA (78bp) protein (26aa)
Putative DNA methylase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z793_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KHK93374.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
N-6 adenine-specific DNA methylase
SCNpilot_bf_inoc_scaffold_954_curated_2
unknown

Not on your lists

comp(1020..2726)
DNA (1707bp) protein (569aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_954_curated_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2820..3335)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B5DD4B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB54234.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_954_curated_4
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3345..4163)
DNA (819bp) protein (273aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
trehalose-phosphatase; K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12]
Trehalose-6-phosphate phosphatase n=1 Tax=Patulibacter medicamentivorans RepID=H0E8W5_9ACTN
SCNpilot_bf_inoc_scaffold_954_curated_5

Not on your lists

4290..5111
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2U6_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKK71553.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_954_curated_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5201..8152)
DNA (2952bp) protein (984aa)
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
UvrD/REP helicase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2U4_CONWI
SCNpilot_bf_inoc_scaffold_954_curated_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

8223..9041
DNA (819bp) protein (273aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
Inositol monophosphatase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2U3_CONWI
Inositol monophosphatase {ECO:0000313|EMBL:ADB54224.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_954_curated_8
unknown

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9173..9673
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_954_curated_9
unknown

Not on your lists

comp(9795..11825)
DNA (2031bp) protein (677aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_954_curated_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11822..13234)
DNA (1413bp) protein (471aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F274_CONWI
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB50249.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_954_curated_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13418..14365
DNA (948bp) protein (316aa)
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
NAD-dependent epimerase/dehydratase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZT4_CONWI
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADB53922.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_954_curated_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15094..16461)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDM7_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49601.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_954_curated_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16608..18251
DNA (1644bp) protein (548aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:ADB53928.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ADB53928.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0J4_CONWI
SCNpilot_bf_inoc_scaffold_954_curated_14
Deinococcus phoenicis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(18261..19760)
DNA (1500bp) protein (500aa)
RecQ familyATP-dependent DNA helicase; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI0003639A35
RecQ familyATP-dependent DNA helicase {ECO:0000313|EMBL:EYB67567.1}; TaxID=1476583 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus phoenicis.;"
SCNpilot_bf_inoc_scaffold_954_curated_15
unknown

Not on your lists

19874..20101
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_954_curated_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20280..21860
DNA (1581bp) protein (527aa)
Carboxyl transferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0J9_CONWI
carboxyl transferase
Carboxyl transferase {ECO:0000313|EMBL:ADB53933.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_954_curated_17
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

21971..22864
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EBU4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN08846.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_954_curated_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(22991..23551)
DNA (561bp) protein (187aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA19_CONWI
peptidoglycan-binding protein
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:ADB53114.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_954_curated_19
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23878..24681
DNA (804bp) protein (268aa)
Oxidoreductase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5X0M1_MYCKA
Short chain dehydrogenase family protein {ECO:0000313|EMBL:EUA09843.1}; TaxID=1299327 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;"
oxidoreductase
SCNpilot_bf_inoc_scaffold_954_curated_20
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24739..27474
DNA (2736bp) protein (912aa)
aconitate hydratase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Aconitase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKP3_NOCSJ
SCNpilot_bf_inoc_scaffold_954_curated_21
unknown

Not on your lists

27516..27776
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_954_curated_22
unknown

Not on your lists

27779..28027
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_954_curated_23
unknown

Not on your lists

comp(28359..28757)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_954_curated_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(28771..31365)
DNA (2595bp) protein (865aa)
2-oxoglutarate dehydrogenase, E1 subunit; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCK1_CONWI
2-oxoglutarate dehydrogenase, E1 subunit {ECO:0000313|EMBL:ADB49474.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_954_curated_25
unknown

Not on your lists

31671..31946
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_954_curated_26
unknown

Not on your lists

32562..32795
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_954_curated_27
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

33699..34283
DNA (585bp) protein (195aa)
short-chain dehydrogenase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B73582
hypothetical protein
Male sterility domain protein {ECO:0000313|EMBL:ADB52963.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_954_curated_28
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

34280..34648
DNA (369bp) protein (123aa)
Male sterility domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8W8_CONWI
hypothetical protein
Male sterility domain protein {ECO:0000313|EMBL:ADB52963.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_954_curated_29
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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36524..37405
DNA (882bp) protein (294aa)
UbiA prenyltransferase n=5 Tax=Clostridium thermocellum RepID=A3DIW0_CLOTH
UbiA prenyltransferase
Tax=RBG_13_Chloroflexi_56_8_curated
SCNpilot_bf_inoc_scaffold_954_curated_30
unknown

Not on your lists

comp(37524..37940)
DNA (417bp) protein (139aa)

This feature has no annotations

Displaying items 1-30 of 54 in total

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