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SCNpilot_bf_inoc_scaffold_1783_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1783_curated_1
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..114)
DNA (114bp) protein (38aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
ATP-dependent DNA helicase PcrA; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
Putative ATP-dependent DNA helicase PcrA n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8R7_9ACTO
SCNpilot_bf_inoc_scaffold_1783_curated_2
unknown

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comp(711..1301)
DNA (591bp) protein (197aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1783_curated_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(1318..2049)
DNA (732bp) protein (244aa)
Serine acetyltransferase {ECO:0000313|EMBL:EHN12653.1}; EC=2.3.1.30 {ECO:0000313|EMBL:EHN12653.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
serine O-acetyltransferase (EC:2.3.1.30); K00640 serine O-acetyltransferase [EC:2.3.1.30]
Serine acetyltransferase n=1 Tax=Patulibacter medicamentivorans RepID=H0E0Z2_9ACTN
SCNpilot_bf_inoc_scaffold_1783_curated_4

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comp(2046..2969)
DNA (924bp) protein (308aa)
Cysteine synthase {ECO:0000313|EMBL:CBH76124.1}; EC=2.5.1.47 {ECO:0000313|EMBL:CBH76124.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47]
Cysteine synthase n=1 Tax=mine drainage metagenome RepID=E6PI34_9ZZZZ
SCNpilot_bf_inoc_scaffold_1783_curated_5
unknown

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comp(2966..3514)
DNA (549bp) protein (183aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1783_curated_6
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3565..4089)
DNA (525bp) protein (175aa)
ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235) RepID=A9WUJ4_RENSM
Uncharacterized protein {ECO:0000313|EMBL:KJK13785.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
SCNpilot_bf_inoc_scaffold_1783_curated_7
unknown

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comp(4107..4715)
DNA (609bp) protein (203aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1783_curated_8
unknown

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comp(5018..5239)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1783_curated_9

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comp(5552..5950)
DNA (399bp) protein (133aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0F8_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKK78479.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BadM/Rrf2 family transcriptional regulator
SCNpilot_bf_inoc_scaffold_1783_curated_10
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6082..6675
DNA (594bp) protein (198aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS72_PARL1
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABS62755.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_bf_inoc_scaffold_1783_curated_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(6826..7929)
DNA (1104bp) protein (368aa)
Transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0G0_CONWI
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB52020.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1783_curated_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(8008..9387)
DNA (1380bp) protein (460aa)
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Glutamate--tRNA ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0G1_CONWI
SCNpilot_bf_inoc_scaffold_1783_curated_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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9488..10243
DNA (756bp) protein (252aa)
apurinic endonuclease Apn1 (EC:3.1.21.2); K01151 deoxyribonuclease IV [EC:3.1.21.2]
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Probable endonuclease 4 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0G2_CONWI
SCNpilot_bf_inoc_scaffold_1783_curated_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(10298..10870)
DNA (573bp) protein (191aa)
Alpha/beta hydrolase fold protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7D6_CONWI
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADB48907.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 14 items

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