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SCNpilot_bf_inoc_scaffold_1788_curated

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1788_curated_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(2..145)
DNA (144bp) protein (48aa)
Glycosyl transferase group 1 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2B4_CONWI
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADB50289.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1788_curated_2
unknown

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503..769
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1788_curated_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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865..2211
DNA (1347bp) protein (449aa)
L-aspartate oxidase {ECO:0000313|EMBL:EHN10226.1}; EC=1.4.3.16 {ECO:0000313|EMBL:EHN10226.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; K00278 L-aspartate oxidase [EC:1.4.3.16]
L-aspartate oxidase n=1 Tax=Patulibacter medicamentivorans RepID=H0E7W8_9ACTN
SCNpilot_bf_inoc_scaffold_1788_curated_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

2222..4258
DNA (2037bp) protein (679aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14]
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:ADB50283.1}; EC=3.5.2.9 {ECO:0000313|EMBL:ADB50283.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2A8_CONWI
SCNpilot_bf_inoc_scaffold_1788_curated_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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4255..5814
DNA (1560bp) protein (520aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14]
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:ADB50282.1}; EC=3.5.2.9 {ECO:0000313|EMBL:ADB50282.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2A7_CONWI
SCNpilot_bf_inoc_scaffold_1788_curated_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5960..6589
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2A6_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB50281.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1788_curated_7

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6635..7393
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2A3_CONWI
Marine sediment metagenome DNA, contig: S01H1_S00023 {ECO:0000313|EMBL:GAF96917.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1788_curated_8
unknown

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comp(7354..7551)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1788_curated_9
unknown

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comp(7598..7840)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1788_curated_10
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(7881..8348)
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:AHY47249.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
SCNpilot_bf_inoc_scaffold_1788_curated_11

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comp(8362..8757)
DNA (396bp) protein (132aa)
Mov34/MPN/PAD-1 family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2A1_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKL81801.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Mov34/MPN/PAD-1 family protein
SCNpilot_bf_inoc_scaffold_1788_curated_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(8905..9870)
DNA (966bp) protein (322aa)
cysteine synthase; K12339 cysteine synthase B [EC:2.5.1.47]
Cysteine synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F297_CONWI
Cysteine synthase {ECO:0000313|EMBL:ADB50272.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1788_curated_13
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

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10237..10827
DNA (591bp) protein (197aa)
Extracellular solute-binding protein, family 3 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYQ3_RUBXD
extracellular solute-binding protein; K02030 polar amino acid transport system substrate-binding protein
Tax=RBG_16_Actinobacteria_68_21_curated
SCNpilot_bf_inoc_scaffold_1788_curated_14
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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10848..11105
DNA (258bp) protein (86aa)
ABC-type transporter, periplasmic subunit family 3 n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B379_DESCC
glutamine-binding periplasmic protein of glutamine ABC transporter; K02029 polar amino acid transport system permease protein; K02030 polar amino acid transport system substrate-binding protein
ABC-type transporter, periplasmic subunit family 3 {ECO:0000313|EMBL:AEF95110.1}; Flags: Precursor;; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 /; CO-1-SRB).;"
SCNpilot_bf_inoc_scaffold_1788_curated_15
unknown

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comp(11536..11697)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1788_curated_16
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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11826..12590
DNA (765bp) protein (255aa)
glnQ; glutamine ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] rbh
Glutamine ABC transporter, ATP-binding protein (GlnQ) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29577_ARCFU rbh
Glutamine ABC transporter, ATP-binding protein (GlnQ) {ECO:0000313|EMBL:AAB90561.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM; 9628 / NBRC 100126).;"
SCNpilot_bf_inoc_scaffold_1788_curated_17
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12664..14250
DNA (1587bp) protein (529aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Frankia sp. CN3 RepID=G6HGB8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJS60273.1}; TaxID=359131 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
EmrB/QacA subfamily drug resistance transporter
SCNpilot_bf_inoc_scaffold_1788_curated_18
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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14247..15146
DNA (900bp) protein (300aa)
RNA polymerase sigma 70 n=1 Tax=Streptomyces sp. FxanaC1 RepID=UPI00035C8915
RNA polymerase sigma 70 {ECO:0000313|EMBL:KKA41445.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
RNA polymerase, sigma-24 subunit, ecf subfamily protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_bf_inoc_scaffold_1788_curated_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15143..15421)
DNA (279bp) protein (93aa)
ThiamineS protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F296_CONWI
sulfur carrier protein ThiS
ThiamineS protein {ECO:0000313|EMBL:ADB50271.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1788_curated_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15453..16601)
DNA (1149bp) protein (383aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F295_CONWI
UBA/THIF-type NAD/FAD binding protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1788_curated_21
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16775..17638)
DNA (864bp) protein (288aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; Flags: Precursor;; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
Protease HtpX homolog n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CB41_DESTA
Heat shock protein
Displaying 21 items

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