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SCNpilot_bf_inoc_scaffold_3569_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_3569_curated_1
unknown

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1..303
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_3569_curated_2
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(306..1244)
DNA (939bp) protein (313aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000361E9E3
SCNpilot_bf_inoc_scaffold_3569_curated_3
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1241..1609)
DNA (369bp) protein (123aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
aspartate 1-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11]
aspartate decarboxylase n=1 Tax=Corynebacterium nuruki RepID=UPI0002486157
SCNpilot_bf_inoc_scaffold_3569_curated_4
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1632..2567)
DNA (936bp) protein (312aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
pantoate/beta-alanine ligase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1]
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003673BC8
SCNpilot_bf_inoc_scaffold_3569_curated_5
unknown

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3107..3346
DNA (240bp) protein (80aa)
hypothetical protein
SCNpilot_bf_inoc_scaffold_3569_curated_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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3384..3617
DNA (234bp) protein (78aa)
Sec-independent protein translocase protein TatA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3U7_CONWI
twin-arginine translocation protein, TatA/E family subunit; K03116 sec-independent protein translocase protein TatA
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_3569_curated_7
Coffea canephora, Coffea, Gentianales, asterids, Streptophyta, Viridiplantae

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3651..4226
DNA (576bp) protein (192aa)
PREDICTED: sec-independent protein translocase protein TatC-like n=1 Tax=Brachypodium distachyon RepID=UPI000234E3EA
Coffea canephora DH200=94 genomic scaffold, scaffold_5 {ECO:0000313|EMBL:CDP00707.1}; TaxID=49390 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea.;" source="Coffea canephora (Robusta coffee).;"
sec-independent protein translocase protein TatC-like; K03118 sec-independent protein translocase protein TatC
SCNpilot_bf_inoc_scaffold_3569_curated_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(4214..4843)
DNA (630bp) protein (210aa)
Acetyltransferase (Isoleucine patch superfamily)-like protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAY9_CONWI
acetyltransferase (isoleucine patch superfamily)-like protein
Acetyltransferase (Isoleucine patch superfamily)-like protein {ECO:0000313|EMBL:ADB51302.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_3569_curated_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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4926..5882
DNA (957bp) protein (319aa)
ROK family protein; K00845 glucokinase [EC:2.7.1.2]
ROK family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF08_CONWI
ROK family protein {ECO:0000313|EMBL:ADB51725.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_3569_curated_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(5895..7121)
DNA (1227bp) protein (409aa)
Inner-membrane translocator n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFF1_CONWI
inner-membrane translocator; K10544 D-xylose transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:ADB53744.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_3569_curated_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(7118..7948)
DNA (831bp) protein (277aa)
ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFF2_CONWI
ABC transporter related protein {ECO:0000313|EMBL:ADB53745.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_3569_curated_12
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(7951..8484)
DNA (534bp) protein (178aa)
ABC transporter substrate-binding protein n=1 Tax=Patulibacter americanus RepID=UPI0003B5996B
L-arabinose-binding periplasmic protein AraF (TC 3.A.1.2.2) {ECO:0000313|EMBL:EHN10863.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
sugar ABC transporter substrate-binding protein
SCNpilot_bf_inoc_scaffold_3569_curated_13
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8531..9100)
DNA (570bp) protein (190aa)
Solute-binding protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3G0R2_STIAD
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:CCH75685.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
solute-binding protein; K02058 simple sugar transport system substrate-binding protein
Displaying 13 items

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