ggKbase home page

SCNpilot_bf_inoc_scaffold_1151_curated

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1151_curated_1
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..446
DNA (444bp) protein (148aa)
Ser/Thr phosphatase domain protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6WX47_PROPF
Ser/Thr phosphatase domain protein
Ser/Thr phosphatase domain protein {ECO:0000313|EMBL:AFN47826.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
SCNpilot_bf_inoc_scaffold_1151_curated_2
unknown

Not on your lists

comp(1967..2788)
DNA (822bp) protein (274aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1151_curated_3
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3395..3595
DNA (201bp) protein (67aa)
Conserved domain protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67MA9_SYMTH
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:BAD41184.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
SCNpilot_bf_inoc_scaffold_1151_curated_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

4360..4932
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B31E5E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB53112.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1151_curated_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5569..7374)
DNA (1806bp) protein (602aa)
Sodium/hydrogen exchanger n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2U9_CONWI
sodium/hydrogen exchanger; K11105 cell volume regulation protein A
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ADB54230.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1151_curated_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7401..8855)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1G6_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB52129.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1151_curated_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(8852..9310)
DNA (459bp) protein (153aa)
Glycosyl transferase family 2 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1G4_CONWI
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADB52127.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1151_curated_8
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

9950..11035
DNA (1086bp) protein (362aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
riboflavin biosynthesis protein RibD n=1 Tax=Patulibacter americanus RepID=UPI0003B564C5
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
SCNpilot_bf_inoc_scaffold_1151_curated_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11035..11643
DNA (609bp) protein (203aa)
riboflavin synthase, subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ADB52124.1}; EC=2.5.1.9 {ECO:0000313|EMBL:ADB52124.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Riboflavin synthase, alpha subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1G1_CONWI
SCNpilot_bf_inoc_scaffold_1151_curated_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11640..13028
DNA (1389bp) protein (463aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
Riboflavin biosynthesis protein RibBA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1G0_CONWI
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1151_curated_11
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13009..13515
DNA (507bp) protein (169aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Patulibacter medicamentivorans RepID=H0E3W5_9ACTN
SCNpilot_bf_inoc_scaffold_1151_curated_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


13537..13728
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=1 Tax=Patulibacter americanus RepID=UPI0003B463E6
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28
Tax=RBG_16_Actinobacteria_67_10_curated
SCNpilot_bf_inoc_scaffold_1151_curated_13
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13910..16096)
DNA (2187bp) protein (729aa)
Putative integral membrane export protein n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RQU1_FRAAA
integral membrane export protein; K06994 putative drug exporter of the RND superfamily
Putative integral membrane export protein {ECO:0000313|EMBL:CAJ60082.1}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
SCNpilot_bf_inoc_scaffold_1151_curated_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16302..17951
DNA (1650bp) protein (550aa)
DAK2 domain fusion protein YloV n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1F7_CONWI
DAK2 domain fusion protein YloV; K07030
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:ADB52120.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1151_curated_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17948..20104
DNA (2157bp) protein (719aa)
DEAD/DEAH box helicase; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
DEAD/DEAH box helicase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1F5_CONWI
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ADB52118.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1151_curated_16
Selenomonas artemidis, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20126..20665
DNA (540bp) protein (180aa)
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EFW30368.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFW30368.1};; TaxID=749551 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas artemidis F0399.;"
RNA methyltransferase, RsmD family n=1 Tax=Selenomonas sp. FOBRC6 RepID=J7TUL8_9FIRM
methyltransferase
SCNpilot_bf_inoc_scaffold_1151_curated_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20662..21162
DNA (501bp) protein (167aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC
Phosphopantetheine adenylyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1F3_CONWI
SCNpilot_bf_inoc_scaffold_1151_curated_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

21285..21764
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1F2_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB52115.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1151_curated_19
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(22028..22552)
DNA (525bp) protein (175aa)
Protein clustered with ribosomal protein L32p n=1 Tax=Patulibacter medicamentivorans RepID=H0E9S5_9ACTN
Protein clustered with ribosomal protein L32p {ECO:0000313|EMBL:EHN09574.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein; K07040 uncharacterized protein
SCNpilot_bf_inoc_scaffold_1151_curated_20
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22569..23105
DNA (537bp) protein (179aa)
Methyltransferase type 11 n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J446_FRASU
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ADP81825.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_bf_inoc_scaffold_1151_curated_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


23172..23381
DNA (210bp) protein (70aa)
50S ribosomal protein L32 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1E6_CONWI
50S ribosomal protein L32; K02911 large subunit ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1151_curated_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

23407..24441
DNA (1035bp) protein (345aa)
fatty acid/phospholipid synthesis protein PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15]
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter
Phosphate acyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1E5_CONWI
SCNpilot_bf_inoc_scaffold_1151_curated_23
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

24450..24695
DNA (246bp) protein (82aa)
Acyl carrier protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E9T0_9ACTN
phosphopantetheine-binding protein; K02078 acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
SCNpilot_bf_inoc_scaffold_1151_curated_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

24697..25386
DNA (690bp) protein (230aa)
ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3]
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Ribonuclease 3 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1E3_CONWI
Displaying 24 items

View Taxonomy