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SCNpilot_bf_inoc_scaffold_1633_curated

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1633_curated_1
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..199)
DNA (198bp) protein (66aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EFC79932.1}; EC=1.1.1.157 {ECO:0000313|EMBL:EFC79932.1};; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
fadC2; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Frankia sp. EUN1f RepID=D3DAY7_9ACTO
SCNpilot_bf_inoc_scaffold_1633_curated_2
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(319..1539)
DNA (1221bp) protein (407aa)
Alkaline D-peptidase n=1 Tax=Patulibacter medicamentivorans RepID=H0E0C8_9ACTN
Alkaline D-peptidase {ECO:0000313|EMBL:EHN12931.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
lpqK; hypothetical protein
SCNpilot_bf_inoc_scaffold_1633_curated_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1536..2207)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F839_CONWI
hypothetical protein; K06927
Uncharacterized protein {ECO:0000313|EMBL:ADB52933.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1633_curated_4
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2204..2707)
DNA (504bp) protein (168aa)
Periplasmic binding protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPT1_ACCPU
Vitamin B12-transporter protein BtuF {ECO:0000313|EMBL:KFB66620.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
periplasmic-binding protein
SCNpilot_bf_inoc_scaffold_1633_curated_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2931..4745)
DNA (1815bp) protein (605aa)
methylmalonyl-CoA mutase (EC:5.4.99.2); K11942 methylmalonyl-CoA mutase [EC:5.4.99.2]
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ADB50714.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ADB50714.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Methylmalonyl-CoA mutase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F6E7_CONWI
SCNpilot_bf_inoc_scaffold_1633_curated_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6803..7312)
DNA (510bp) protein (170aa)
Transcriptional regulator MarR family n=1 Tax=Patulibacter medicamentivorans RepID=H0E4R5_9ACTN
Transcriptional regulator MarR family {ECO:0000313|EMBL:EHN11325.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
MarR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_1633_curated_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7420..7881)
DNA (462bp) protein (154aa)
Transcriptional regulator, MarR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF00_CONWI
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADB51717.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1633_curated_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7878..9353)
DNA (1476bp) protein (492aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF01_CONWI
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ADB51718.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1633_curated_9
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9507..11195
DNA (1689bp) protein (563aa)
cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ACU75285.1}; EC=1.8.1.9 {ECO:0000313|EMBL:ACU75285.1};; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PWK5_CATAD
SCNpilot_bf_inoc_scaffold_1633_curated_10
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11368..12699
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ENT6_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK50872.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_bf_inoc_scaffold_1633_curated_11
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12760..13104)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003814322
ArsR family transcriptional regulator {ECO:0000313|EMBL:EST33002.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
ArsR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_1633_curated_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13107..13565)
DNA (459bp) protein (153aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F613_CONWI
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ADB48686.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1633_curated_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14019..14354
DNA (336bp) protein (112aa)
membrane protein n=1 Tax=Patulibacter americanus RepID=UPI0003B499C6
hypothetical protein; K00389 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ADB50123.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1633_curated_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14356..15027
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZY2_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49958.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1633_curated_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15189..15581)
DNA (393bp) protein (131aa)
Protein tyrosine phosphatase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LVV6_ACIC1
protein tyrosine phosphatase
Tax=RBG_16_Actinobacteria_68_12_curated
SCNpilot_bf_inoc_scaffold_1633_curated_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15589..15942)
DNA (354bp) protein (118aa)
ArsR family transcriptional regulator n=1 Tax=Patulibacter americanus RepID=UPI0003B5BDFA
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADB49025.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1633_curated_17
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15995..16705
DNA (711bp) protein (237aa)
Major intrinsic protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J9N9_FRASU
major intrinsic protein
Major intrinsic protein {ECO:0000313|EMBL:ADP84542.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_bf_inoc_scaffold_1633_curated_18
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16715..17416
DNA (702bp) protein (234aa)
Nodulin 21-related protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EBB8_9ACTN
Nodulin 21-related protein {ECO:0000313|EMBL:EHN08994.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1633_curated_19
Lysinibacillus odysseyi, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17565..18338)
DNA (774bp) protein (258aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XF01_NOVAD
Lipase {ECO:0000313|EMBL:KGR81790.1}; TaxID=1220589 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus odysseyi 34hs-1 = NBRC 100172.;"
alpha/beta hydrolase domain-containing protein
SCNpilot_bf_inoc_scaffold_1633_curated_20
Thermoanaerobacter wiegelii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18607..19383)
DNA (777bp) protein (259aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MXN0_9THEO
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEM79260.1}; TaxID=697303 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter wiegelii Rt8.B1.;"
SCNpilot_bf_inoc_scaffold_1633_curated_21
Gordonia terrae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19401..20318)
DNA (918bp) protein (306aa)
creatininase; K01470 creatinine amidohydrolase [EC:3.5.2.10]
Putative creatinine amidohydrolase n=1 Tax=Gordonia terrae NBRC 100016 RepID=H5UFV6_9ACTO
Putative creatinine amidohydrolase {ECO:0000313|EMBL:GAB44614.1}; TaxID=1089454 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia terrae NBRC 100016.;"
SCNpilot_bf_inoc_scaffold_1633_curated_22
Williamsia sp. D3, Williamsia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20426..21046)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Williamsia sp. D3 RepID=V8D1A1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETD33349.1}; TaxID=1313067 species="Bacteria; Actinobacteria; Corynebacteriales; Williamsiaceae; Williamsia.;" source="Williamsia sp. D3.;"
Cupin 2 barrel domain-containing protein
SCNpilot_bf_inoc_scaffold_1633_curated_23
Williamsia sp. D3, Williamsia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21095..21469)
DNA (375bp) protein (125aa)
alcohol dehydrogenase; K00100 [EC:1.1.1.-]
Alcohol dehydrogenase n=1 Tax=Williamsia sp. D3 RepID=V8D119_9ACTO
Alcohol dehydrogenase {ECO:0000313|EMBL:ETD33274.1}; TaxID=1313067 species="Bacteria; Actinobacteria; Corynebacteriales; Williamsiaceae; Williamsia.;" source="Williamsia sp. D3.;"
SCNpilot_bf_inoc_scaffold_1633_curated_24
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(22225..23067)
DNA (843bp) protein (281aa)
fructose-bisphosphate aldolase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B6J9_METTP
Tax=RBG_13_Chloroflexi_68_17_curated
SCNpilot_bf_inoc_scaffold_1633_curated_25
Williamsia sp. D3, Williamsia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23211..23861)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Williamsia sp. D3 RepID=V8D1A1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETD33349.1}; TaxID=1313067 species="Bacteria; Actinobacteria; Corynebacteriales; Williamsiaceae; Williamsia.;" source="Williamsia sp. D3.;"
XRE family transcriptional regulator
SCNpilot_bf_inoc_scaffold_1633_curated_26
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23981..25201)
DNA (1221bp) protein (407aa)
Extracellular solute-binding protein family 1 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A081_STAND
ABC transporter periplasmic protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADH89342.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_bf_inoc_scaffold_1633_curated_27
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(25267..26133)
DNA (867bp) protein (289aa)
Luciferase-like, subgroup n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVT2_9CHLR
luciferase-like protein
Tax=RBG_16_Chloroflexi_54_11_curated
SCNpilot_bf_inoc_scaffold_1633_curated_28
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26135..27082)
DNA (948bp) protein (316aa)
ABC transporter permease n=1 Tax=Xanthobacteraceae RepID=UPI00035D951E
Uncharacterized protein {ECO:0000313|EMBL:AKG36300.1}; TaxID=1333534 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus ATCC 35681.;"
binding-protein-dependent transporters inner membrane component
SCNpilot_bf_inoc_scaffold_1633_curated_29
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27082..27984)
DNA (903bp) protein (301aa)
Spermidine/putrescine transport system permease protein PotB n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X3F0_RHIFR
potB2; spermidine/putrescine transport system permease PotB
Spermidine/putrescine transport system permease protein PotB {ECO:0000313|EMBL:AFL50406.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_bf_inoc_scaffold_1633_curated_30
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27957..28511)
DNA (555bp) protein (185aa)
spermidine/putrescine ABC transporter ATP-binding protein; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31]
UPI0003CF3977 related cluster n=1 Tax=unknown RepID=UPI0003CF3977
Spermidine/putrescine ABC transporter ATPase {ECO:0000313|EMBL:AHV98933.1}; TaxID=1268072 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabinae T27.;"
Displaying items 1-30 of 32 in total

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