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SCNpilot_bf_inoc_scaffold_5395_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_5395_curated_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..999)
DNA (999bp) protein (333aa)
Transcriptional regulator, putative ATPase, winged helix family n=1 Tax=Frankia sp. CN3 RepID=G6HIX7_9ACTO
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACV76711.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_bf_inoc_scaffold_5395_curated_2
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(1003..1656)
DNA (654bp) protein (218aa)
ribose 5-phosphate isomerase (EC:5.3.1.6); K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6]
Ribose-5-phosphate isomerase {ECO:0000256|SAAS:SAAS00087684}; EC=5.3.1.6 {ECO:0000256|SAAS:SAAS00087684};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Ribose 5-phosphate isomerase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJ99_NAKMY
SCNpilot_bf_inoc_scaffold_5395_curated_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1751..3172
DNA (1422bp) protein (474aa)
adenosylhomocysteinase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1]
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Adenosylhomocysteinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F928_CONWI
SCNpilot_bf_inoc_scaffold_5395_curated_4
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3205..3825
DNA (621bp) protein (207aa)
Forkhead domain-containing protein n=3 Tax=Rhodococcus RepID=I0WVK2_9NOCA
forkhead domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AHK30514.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
SCNpilot_bf_inoc_scaffold_5395_curated_5
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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4480..5082
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HF39_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL91626.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
SCNpilot_bf_inoc_scaffold_5395_curated_6
unknown

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5030..5524
DNA (495bp) protein (165aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_5395_curated_7
Mycobacterium gastri, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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5580..7367
DNA (1788bp) protein (596aa)
Putative serine/threonine protein kinase n=1 Tax=Gordonia hirsuta DSM 44140 = NBRC 16056 RepID=L7L7E9_9ACTO
Serine/threonine protein kinase {ECO:0000313|EMBL:ETW26637.1}; TaxID=1436723 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
serine/threonine protein kinase
SCNpilot_bf_inoc_scaffold_5395_curated_8
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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7387..9546
DNA (2160bp) protein (720aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
transketolase; K00615 transketolase [EC:2.2.1.1]
transketolase n=1 Tax=Streptomyces sp. CNS615 RepID=UPI00036FC725
SCNpilot_bf_inoc_scaffold_5395_curated_9
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9509..10546
DNA (1038bp) protein (346aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2]
transaldolase n=1 Tax=Methylobacter marinus RepID=UPI00035F6325
SCNpilot_bf_inoc_scaffold_5395_curated_10
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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10543..12189
DNA (1647bp) protein (549aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium llatzerense.;"
pgi; glucose-6-phosphate isomerase; K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BYE4_STRBB
SCNpilot_bf_inoc_scaffold_5395_curated_11
unknown

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comp(12194..12910)
DNA (717bp) protein (239aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_5395_curated_12
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

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13340..13528
DNA (189bp) protein (63aa)
cytochrome bd ubiquinol oxidase subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-]
Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTK6_PSEUX
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
Displaying 12 items

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