ggKbase home page

SCNpilot_bf_inoc_scaffold_2326_curated

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_2326_curated_1
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..155
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00036F41F1
Uncharacterized protein {ECO:0000313|EMBL:KGC10739.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia mallei (Pseudomonas mallei).;"
SCNpilot_bf_inoc_scaffold_2326_curated_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

152..1153
DNA (1002bp) protein (334aa)
Uncharacterized protein id=1863211 bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium vaccae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cyclase family protein
Tax=GWA2_Rokubacteria_73_35_curated
SCNpilot_bf_inoc_scaffold_2326_curated_3
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

1153..1518
DNA (366bp) protein (122aa)
Cupin 2, conserved barrel domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3K3_THERP
cupin 2, conserved barrel domain protein
Cupin 2, conserved barrel domain protein {ECO:0000313|EMBL:ACM06449.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
SCNpilot_bf_inoc_scaffold_2326_curated_4
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

1519..2889
DNA (1371bp) protein (457aa)
aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde Dehydrogenase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT61_9BACT
Aldehyde Dehydrogenase {ECO:0000313|EMBL:KKT74247.1}; TaxID=1619057 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_44_7.;"
SCNpilot_bf_inoc_scaffold_2326_curated_5
Couchioplanes caeruleus, Couchioplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2886..3689
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003829DF1
SDR reductase {ECO:0000313|EMBL:AGM21657.1}; TaxID=56438 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Couchioplanes.;" source="Couchioplanes caeruleus.;"
short-chain dehydrogenase of unknown substrate specificity
SCNpilot_bf_inoc_scaffold_2326_curated_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3729..4655
DNA (927bp) protein (309aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
Ppx/GppA phosphatase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEC3_CONWI
Ppx/GppA phosphatase {ECO:0000313|EMBL:ADB53615.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2326_curated_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5714..7336)
DNA (1623bp) protein (541aa)
thiamine pyrophosphate TPP binding domain-containing protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Thiamine pyrophosphate protein TPP binding domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEC4_CONWI
Thiamine pyrophosphate protein TPP binding domain protein {ECO:0000313|EMBL:ADB53616.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2326_curated_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7401..8372)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00037E406B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49936.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2326_curated_9
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8621..8812)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Nocardiopsis halotolerans RepID=UPI00034D4797
RNA polymerase {ECO:0000313|EMBL:ETK30889.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_bf_inoc_scaffold_2326_curated_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10155..11000
DNA (846bp) protein (282aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F003_CONWI
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB49979.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2326_curated_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11054..11980)
DNA (927bp) protein (309aa)
ribonucleotide reductase; K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Ribonucleotide reductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FED6_CONWI
Ribonucleotide reductase {ECO:0000313|EMBL:ADB53628.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2326_curated_12
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12699..13253)
DNA (555bp) protein (185aa)
UPF0173 metal-dependent hydrolase PAI11_39300 n=1 Tax=Patulibacter medicamentivorans RepID=H0EAQ6_9ACTN
UPF0173 metal-dependent hydrolase PAI11_39300 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
beta-lactamase
SCNpilot_bf_inoc_scaffold_2326_curated_13
unknown

Not on your lists

comp(13693..13926)
DNA (234bp) protein (78aa)

This feature has no annotations

Displaying 13 items

View Taxonomy