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SCNpilot_bf_inoc_scaffold_2282_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_2282_curated_1
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..425)
DNA (423bp) protein (141aa)
Uncharacterised protein {ECO:0000313|EMBL:CRE33347.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
SCNpilot_bf_inoc_scaffold_2282_curated_2
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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722..1513
DNA (792bp) protein (264aa)
protocatechuate 3,4-dioxygenase subunit beta; K00449 protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
Protocatechuate 3,4-dioxygenase subunit beta n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RH14_9ACTO
Protocatechuate 3,4-dioxygenase subunit beta {ECO:0000313|EMBL:EEP70363.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
SCNpilot_bf_inoc_scaffold_2282_curated_3
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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1510..2097
DNA (588bp) protein (196aa)
pcaG; Protocatechuate 3,4-dioxygenase, alpha chain (EC:1.13.11.3)
protocatechuate 3,4-dioxygenase subunit alpha n=1 Tax=Nocardiopsis baichengensis RepID=UPI000345E6D4
Protocatechuate 3,4-dioxygenase {ECO:0000313|EMBL:KIH98601.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
SCNpilot_bf_inoc_scaffold_2282_curated_4
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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2072..3454
DNA (1383bp) protein (461aa)
3-carboxy-cis,cis-muconate cycloisomerase; K01857 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
3-carboxy-cis,cis-muconate cycloisomerase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237AA09
3-carboxy-cis,cis-muconate cyclo-isomerase {ECO:0000313|EMBL:ACZ90587.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_bf_inoc_scaffold_2282_curated_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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3546..4310
DNA (765bp) protein (255aa)
3-oxoadipate enol-lactonase; K01055 3-oxoadipate enol-lactonase [EC:3.1.1.24]
3-oxoadipate enol-lactonase {ECO:0000313|EMBL:ABG04540.1}; EC=3.1.1.24 {ECO:0000313|EMBL:ABG04540.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
3-oxoadipate enol-lactonase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVN8_RUBXD
SCNpilot_bf_inoc_scaffold_2282_curated_6
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4307..4750
DNA (444bp) protein (148aa)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase; K14727 3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase [EC:3.1.1.24 4.1.1.44]
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C4H5_STRBB
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ADI06026.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
SCNpilot_bf_inoc_scaffold_2282_curated_7
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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4804..5958
DNA (1155bp) protein (385aa)
peptidase S1 n=1 Tax=Patulibacter americanus RepID=UPI0003B5DC35
Protease Do {ECO:0000313|EMBL:EHN11184.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
peptidase S1 and S6, chymotrypsin/Hap
SCNpilot_bf_inoc_scaffold_2282_curated_8
Mycobacterium fortuitum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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6049..7215
DNA (1167bp) protein (389aa)
Secreted peptidase n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0VPT3_MYCFO
Secreted peptidase {ECO:0000313|EMBL:EJZ13304.1}; TaxID=1214102 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium fortuitum subsp. fortuitum DSM 46621.;"
metalloendopeptidase-like membrane protein
SCNpilot_bf_inoc_scaffold_2282_curated_9
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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7271..7678
DNA (408bp) protein (136aa)
vsr; DNA mismatch endonuclease (EC:3.1.-.-); K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Putative DNA mismatch endonuclease {ECO:0000313|EMBL:BAH52327.1}; EC=3.1.-.- {ECO:0000313|EMBL:BAH52327.1};; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
Putative DNA mismatch endonuclease n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1B9H4_RHOOB
SCNpilot_bf_inoc_scaffold_2282_curated_10
GWA2_OP11_47_11, Amesbacteria, Microgenomates, Bacteria

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comp(7729..8595)
DNA (867bp) protein (289aa)
DNA cytosine methyltransferase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
DNA-cytosine methyltransferase n=1 Tax=Patulibacter americanus RepID=UPI0003B48C2B
Uncharacterized protein {ECO:0000313|EMBL:KKU54816.1}; TaxID=1618357 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_47_11.;"
SCNpilot_bf_inoc_scaffold_2282_curated_11
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8785..9201)
DNA (417bp) protein (139aa)
LysR family transcriptional regulator n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI000374497C
LysR family transcriptional regulator {ECO:0000313|EMBL:KKD06812.1}; TaxID=1415558 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
Transcriptional regulator, LysR family
Displaying 11 items

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