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SCNpilot_bf_inoc_scaffold_6976_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_6976_curated_1
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..1018
DNA (1017bp) protein (339aa)
class V aminotransferase; K04487 cysteine desulfurase [EC:2.8.1.7]
Aminotransferase class V n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1M0_CELFA
Aminotransferase class V {ECO:0000313|EMBL:AEE46319.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_bf_inoc_scaffold_6976_curated_2
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1015..1296
DNA (282bp) protein (94aa)
SirA-like domain-containing protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
SirA-like domain-containing protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1M1_CELFA
SirA-like domain-containing protein {ECO:0000313|EMBL:AEE46320.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_bf_inoc_scaffold_6976_curated_3
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1310..1660)
DNA (351bp) protein (117aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UFV6_CELFN
Uncharacterized protein {ECO:0000313|EMBL:KGM14748.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
iron-sulfur cluster assembly accessory protein
SCNpilot_bf_inoc_scaffold_6976_curated_4
unknown

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comp(2651..2890)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_6976_curated_5
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(2887..3333)
DNA (447bp) protein (149aa)
Arsenate reductase {ECO:0000313|EMBL:EHN13013.1}; EC=1.20.4.1 {ECO:0000313|EMBL:EHN13013.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
heat-shock protein HtpX n=1 Tax=Patulibacter americanus RepID=UPI0003B49CDF
protein tyrosine phosphatase
SCNpilot_bf_inoc_scaffold_6976_curated_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3333..4343)
DNA (1011bp) protein (337aa)
Arsenical-resistance protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8F4_CONWI
arsenic resistance protein; K03325 arsenite transporter, ACR3 family
Arsenical-resistance protein {ECO:0000313|EMBL:ADB49024.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_6976_curated_7
unknown

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comp(5029..5400)
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_6976_curated_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5492..5845
DNA (354bp) protein (118aa)
Transcriptional regulator, ArsR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8F5_CONWI
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADB49025.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_6976_curated_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5833..6759
DNA (927bp) protein (309aa)
arsenite S-adenosylmethyltransferase n=1 Tax=Patulibacter americanus RepID=UPI0003B3ACAB
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ADB49026.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_6976_curated_10
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(6756..7460)
DNA (705bp) protein (235aa)
PhoU family transcriptional regulator n=1 Tax=Patulibacter americanus RepID=UPI0003B50DF7
Phosphate transport system regulatory protein PhoU {ECO:0000313|EMBL:EHN10819.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
phosphate uptake regulator PhoU; K02039 phosphate transport system protein
SCNpilot_bf_inoc_scaffold_6976_curated_11
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(7461..8291)
DNA (831bp) protein (277aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
phosphate ABC transporter ATPase (EC:3.6.3.27); K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27]
phosphate ABC transporter ATP-binding protein n=1 Tax=Patulibacter americanus RepID=UPI0003B4AE99
SCNpilot_bf_inoc_scaffold_6976_curated_12
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(8293..9192)
DNA (900bp) protein (300aa)
phosphate ABC transporter permease n=1 Tax=Patulibacter americanus RepID=UPI0003B5A183
Phosphate transport system permease protein PstC (TC 3.A.1.7.1) {ECO:0000313|EMBL:EHN10817.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
phosphate ABC transporter; K02038 phosphate transport system permease protein
SCNpilot_bf_inoc_scaffold_6976_curated_13
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(9192..10115)
DNA (924bp) protein (308aa)
Phosphate transport system permease protein PstC (TC 3.A.1.7.1) n=1 Tax=Patulibacter medicamentivorans RepID=H0E648_9ACTN
Phosphate transport system permease protein PstC (TC 3.A.1.7.1) {ECO:0000313|EMBL:EHN10817.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
phosphate ABC transporter permease; K02037 phosphate transport system permease protein
SCNpilot_bf_inoc_scaffold_6976_curated_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(10230..11045)
DNA (816bp) protein (272aa)
Phosphate-binding protein PstS n=1 Tax=Patulibacter medicamentivorans RepID=H0E647_9ACTN
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
phosphate ABC transporter substrate-binding protein, PhoT family
Displaying 14 items

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